| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0260 |
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| Symbol | |
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| ID | 4277031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 287049 |
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| End bp | 287663 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133014 |
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| Product | LexA repressor |
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| Protein accession | YP_748961 |
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| Protein GI | 114561448 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.712768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACCGT TAACGCCGCG CCAAGCAGAA ATTTTAGACT TAATTAAAAA CAATATCGCC
GAAACAGGTA TGCCACCCAC TCGTGCTGAA ATTGCGAATC GTCTTGGCTT TAAAAGTGCT
AATGCCGCCG AAGAGCATTT AAAAGCATTA GCCAAAAAAG GCTTTATCGA GATCATGCCT
GGGACCTCAA GAGGCATTCG TTTACCTCAA GAAGAACAGG TTGAAACCGG TCTGCCACTG
ATTGGACAGG TTGCTGCTGG TGAACCAATT TTGGCTCAAG AGCATGTAGA GCAATACTAT
CAAGTCGATC CAAACATGTT TAAGCCCGCC GCAGATTTTT TGCTGCGAGT ACGTGGTGAC
AGCATGAAAA ATATCGGAAT TTTAGAAGGC GACTTACTCG CTGTACATAA AATGCAGCAA
GCACGTAATG GCCAGGTTGT TGTGGCACGT GTTGATGATG ACGTCACCGT AAAACGATTT
GAACAAAAAG GTAATGTGAT TTATCTGCAT GCCGAAAATG AAGATTACAA TCCGATAAAA
GTAGATTTAA GTTGCCAAAG CCTAACCATC GAAGGGCTTG CCGTTGGCGT TATCCGTAAT
GGAGATTGGT TATGA
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| Protein sequence | MRPLTPRQAE ILDLIKNNIA ETGMPPTRAE IANRLGFKSA NAAEEHLKAL AKKGFIEIMP
GTSRGIRLPQ EEQVETGLPL IGQVAAGEPI LAQEHVEQYY QVDPNMFKPA ADFLLRVRGD
SMKNIGILEG DLLAVHKMQQ ARNGQVVVAR VDDDVTVKRF EQKGNVIYLH AENEDYNPIK
VDLSCQSLTI EGLAVGVIRN GDWL
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