Gene Sfri_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0252 
Symbol 
ID4277023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp279903 
End bp280454 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID638133006 
Producthypothetical protein 
Protein accessionYP_748953 
Protein GI114561440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCCC TACCGAAAAA AAGTAATAAA GCACTACTGG TCTTACTGCT GGTATTTATT 
TTACCAGTTG CCTTAGCCAA ATTAGTGTTA AGCCTAGAGC TGTATAACGG AGCGGCAACC 
AACAAAGGGG CATTAATCGC TCCCGACATA AACTACGCTA ACTTAGCCAT GGAGAATCCT 
AAACCTCATG CATGGCAAGT ACTGTTTTTT TTACCCGAAA CCTGCAATGA GCAATGCCAG 
GAACGGCTGT ATATTTTACA CCAGAGCTAT ATTGCCCTTG GCAAAGATAG GGATCGTGTT 
ACCCCAATCA TTGTAGTAAA CAGCCACAGT GACACCAAAA TCCTCAAGCA ATTAAATATC 
TCTTTTGACC AAGCAAATGC CAATGACGCA CTTGCTGCAC TATTGACCAA TCAACAGCTT 
ATTATTGTCG ACCCTCTAGG TAGCTTAGTC ATGCAATATG ACAACGTAAT AGGTCACGAC 
GCCAATATTG CTCAGGGCAA AGCCATGATT GCCGATTTGC GCAAAATGCT TAAGTTGTCG 
AGGGTTGGCT AA
 
Protein sequence
MNSLPKKSNK ALLVLLLVFI LPVALAKLVL SLELYNGAAT NKGALIAPDI NYANLAMENP 
KPHAWQVLFF LPETCNEQCQ ERLYILHQSY IALGKDRDRV TPIIVVNSHS DTKILKQLNI 
SFDQANANDA LAALLTNQQL IIVDPLGSLV MQYDNVIGHD ANIAQGKAMI ADLRKMLKLS 
RVG