Gene Sfri_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0234 
Symbol 
ID4278667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp259285 
End bp259770 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content43% 
IMG OID638132988 
Producttranscription elongation factor GreB 
Protein accessionYP_748935 
Protein GI114561422 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACTA AGTTAATCAC TTTAGAAGGC TACAATAAAC TCAGAATTGA GCACGACTAC 
CTGTGGAAAG AACAACGTCC TGAAGTCACT AAGATTGTCA CTTGGGCGGC TGGTTTGGGT 
GATCGCTCCG AGAATGCTGA TTACACTTTT AATAAGCGTT TATTAAGGCA AATTGACCGC 
CGAGTACGCT ATTTACGCAA GCTGCTGCCC GAACTCAAAA TTGTCTATTA CGCACCAGAG 
CAAGAAGGCA AAGTGTTTTT TGGCGCCACG GTTGAAATTG AAAACGACGC CGGTGACATT 
AAAACCTTTA AAATTGTCGG CCCAGAAGAA ATTTACGACG AACGTAAAGA CTACATCTCC 
ATCGACTCGC CCATGGCCCG CGCGTTACTC AAAAAACAAG TCGACGATGA AGCGGTAGTG 
AGCACACCTC AAGGCGATAA AACCTGGTAC ATCAATAAGA TTAGTTACAA ACTAGAACAG 
AAATAA
 
Protein sequence
MKTKLITLEG YNKLRIEHDY LWKEQRPEVT KIVTWAAGLG DRSENADYTF NKRLLRQIDR 
RVRYLRKLLP ELKIVYYAPE QEGKVFFGAT VEIENDAGDI KTFKIVGPEE IYDERKDYIS 
IDSPMARALL KKQVDDEAVV STPQGDKTWY INKISYKLEQ K