Gene Sfri_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0232 
Symbol 
ID4278665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp257187 
End bp257966 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content44% 
IMG OID638132986 
Productacetoin reductases 
Protein accessionYP_748933 
Protein GI114561420 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR02415] acetoin reductases 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAC AAGGAAAAGT CGCTCTCGTC ACTGGCGCTG GTCAGGGCAT CGGACGTGCC 
ATTGCACTTC GTTTAGCAAA AGATGGGGCA AATGTTGCCA TCGTTGATCT AAACGAAGAA
AAAATGCTCG CGGTATCTCT TGAGGTAGAA GCTTTTGGTC GAAAATCAAC GACTTTCAAA
GCTGACGTAA GCGACCGAGA ACAAGTTTAT GCCGCTATAA ATCATGCAGA AAAAACCTTA
GGTGGATTCG ATATTATGGT GAATAACGCA GGTATTGCGC AGGTTCAAGC CATATCAGAT
ATTACCCAAG AAGACATGGA TAAAATCCAA AAGATCAACG TAGATGGAAC ACTTTGGGGC
ATTCAAGCCG CGGCAAAGAA ATTCATCGAA CGCAAACAAA AAGGAAAAAT TATAAATGCC
TCTTCCATTG CTGGCCATAA CGGGTTTGCT TTACTAGGTG CATACTCGGC GACTAAATTT
GCAGTGCGCG CGCTAACTCA GGCAGCAGCA CAGGAATATG CTAGTGCAGG TATTACAGTA
AATGCTTATT GCCCTGGTGT GGTCGGAACC GATATGTGGG TTGAGATTGA TAAACGTTTT
TCTGAAATTA CTGGGGCAGC AATAGGTGAA ACGTTTAAAA AATACGTGAA AGGTATCGCA
CTAGGTCGTG CGCAAACACC TGTAGATGTC GCCAACTTTG TTTCATATTT AGCGGGTCCT
GACTCTGATT ATATGACAGG TCAAGCACCG ATGATCGATG GCGGTATGGT TTACCGTTAA
 
Protein sequence
MSLQGKVALV TGAGQGIGRA IALRLAKDGA NVAIVDLNEE KMLAVSLEVE AFGRKSTTFK 
ADVSDREQVY AAINHAEKTL GGFDIMVNNA GIAQVQAISD ITQEDMDKIQ KINVDGTLWG
IQAAAKKFIE RKQKGKIINA SSIAGHNGFA LLGAYSATKF AVRALTQAAA QEYASAGITV
NAYCPGVVGT DMWVEIDKRF SEITGAAIGE TFKKYVKGIA LGRAQTPVDV ANFVSYLAGP
DSDYMTGQAP MIDGGMVYR