| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0226 |
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| Symbol | |
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| ID | 4277960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 248689 |
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| End bp | 249216 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132980 |
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| Product | transcriptional regulator, TetR family protein |
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| Protein accession | YP_748927 |
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| Protein GI | 114561414 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGTTA TGTTAAAACA TCAAATTGCG GCGAGCCTTG AACAGGCTTT TAGCACCCAC
GGATTTGCTG AGCCGAACGT GGCTCAATTG AAAGCGGCAT GTAATGTCAG CTTACGTACA
CTCTATAAAC ATTATCCATC AAAAGAAGCG ATGATCGTTG CGGCGCTAGA GTACAGACAT
CAAAGATATC TGGATTTTTT ACTTAACGAC AATCCCCATA AAGGCATCGA ATCTGTCATC
CATATTTTTC AAATGCTCGA GCTATGGATG ACAGAAAGTG CCCCGCATGG GTGCCTCTCA
ATGAATGCCA TTGCAGCCTT TCCCGACAAC GCGCTTATTA GTAAAGCGGT AAAAGAGCAC
AAAGCCGAAG TTCGTCATAT GTTAGGTCAA CAAAGCAACA GAGACGATCT TGCTACAGCC
CTTTTTATAT TGCATGAAGG GGTATCGAGT GCATGGCCAG TGTTGGGCAC AGAGGCGGTA
ATATCTGCTC AAAAAACCCT ATTACAATTT TTTAAACAGG AGCAATGA
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| Protein sequence | MVVMLKHQIA ASLEQAFSTH GFAEPNVAQL KAACNVSLRT LYKHYPSKEA MIVAALEYRH
QRYLDFLLND NPHKGIESVI HIFQMLELWM TESAPHGCLS MNAIAAFPDN ALISKAVKEH
KAEVRHMLGQ QSNRDDLATA LFILHEGVSS AWPVLGTEAV ISAQKTLLQF FKQEQ
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