| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0223 |
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| Symbol | |
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| ID | 4277957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 244645 |
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| End bp | 246627 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132977 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_748924 |
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| Protein GI | 114561411 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTC TTGGAAAATT AACACTCGAG TCTATTCCGT ATCACGAACC CATTATTATG
GTGACCCTAG CGGCTGTCGC CATTATTGGT GTCATCATTG CGGCCTTAAT TACTAAACAT
CAAAAATGGG GCGTGCTGTG GCACGACTGG TTAACCTCTG TTGACCACAA AAAACTCGGT
ATTATGTATA TCGTATTAGC GATGGTAATG CTGGTCCGTG GTTTTTCTGA CGCGATTATG
ATGCGAACTC AGCAAGCACT TGCCACTAAC GGCGCTGCGG GCTATTTACC ACCAGAACAT
TACGACCAAA TCTTCACAGC CCACGGCGTG ATCATGATTA TCTTTATGGC AATGCCATTT
ATGATTGGTT TAATGAACTT GGTCGTGCCA CTACAGATTG GTGCCCGCGA TGTGGCGTTC
CCATTCTTAA ACAACTTAAG TTTTTGGCTA ACGACCTCTG GCGCGGTGTT AATTAACATA
TCGCTAGGAC TCGGTGAGTT TGCTAAAACC GGTTGGGTAG CTTATCCGCC ATTGTCTGAG
CTGGCCTACA GCCCGGGGGT GGGGGTTGAT TATTATATCT GGGCCTTGCA AATATCCGGT
ATCGGGACAA CCTTAACCGG GGTGAACTTT ATCGCCACTG TGTTAAAAAT GCGTGCGCCT
GGCATGAAGT TAATGCAAAT GCCTATTTTC ACTTGGGCTT GTACTTGGGC TAACGTGTTA
ATCGTTGCAT CGTTCCCCAT TTTAACCGCT GTTTTAGGCA TGTTGACCTT AGACCGTTAT
TTAGATTTCC ACTTCTTTAC CAATGACGGT GGCGGTAACG CCATGATGTA CATCAACCTG
TTTTGGGCTT GGGGTCATCC TGAAGTATAC ATTTTGGTAT TACCGGCTTT CGGTATTTTC
TCTGAAGTGT TTTCAACCTT TACCTCAAAG CGTTTATTTG GTTACACCTC AATGGTGTGG
GCAACCGGTG CGATTTCGGT GCTTGGTTTT ATTGTGTGGT TACACCATTT CTTTACCATG
GGTTCAAGCG CTAACGTTAA CGCCTTCTTC GGCGTAATGA CCATGGTGAT TGCGGTGCCG
ACCGGGGTAA AACTGTTTAA CTGGCTATTT ACTATTTATC GCGGTCGTTT ACGTTTTACC
GTGCCAGTAT TGTGGTCTTT AGGCTTTATG GTGACCTTCA CTATCGGCGG CATGACCGGG
GTATTGTTAG CATTACCTGG TGCCGATTAC GTACTGCATA ACAGCTTGTT TTTAATCGCT
CATTTCCATA ACACCATTAT TGGTGGTGCA GTATTTGGTT ACATGGCTGG TTTTGCTTAC
TGGTTCCCTA AAGCGATGGG TTTCACACTC AATGAACGCT TAGGTAAGGC ATCATTTTGG
TGCTGGCAAA TTGGCTTCTA TGTGGCCTTT ATGCCGTTGT ACGTGCTTGG TTTTATGGGC
ATGACACGTC GTATTAACCA AACCGACAAC CCAGCGTGGA ACTTCTGGCT TTACTTTGCC
GTAGTCGGCG CATTTATCAT TCTTGTGGGT ATTATTTTAC AGTTTGTCCA ATTGTATGTG
AGCTTCCGTG ACCGTGAGCA AAACCTGGAT ACCACAGGCG ATCCATGGAA TGGCCATACG
CTTGAGTGGT CAACATCTTC ACCACCACAG TTCTATAACT TTGCTCAGTT AGATCCTGTA
ACTGACATTG ATGCGTTCAC CGACATGAAA GAAAAAGGCA CCGCCTATCA ACGTCGTGAA
ACATACCAGC CGATCCATAT GCCTAAAAAT ACTGCCAGCG GTATTGCTAT GGCCGCGTGT
ATTACGGCCA TGGGGTTTGC TGCTATTTGG CATATTTGGT GGTTAGCCAT TGTCGGGTTT
GCCGGTACGT TTGTGTTGTT TTTACTGCGC GCTTACGACA ATGACGTTGA CTATTTCGTG
CAGCCAGATG AAGTCGCACG TATTGAAAAT GCACACTTAG ATAACGTAGC AAGGGGCCGA
TAA
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| Protein sequence | MSFLGKLTLE SIPYHEPIIM VTLAAVAIIG VIIAALITKH QKWGVLWHDW LTSVDHKKLG
IMYIVLAMVM LVRGFSDAIM MRTQQALATN GAAGYLPPEH YDQIFTAHGV IMIIFMAMPF
MIGLMNLVVP LQIGARDVAF PFLNNLSFWL TTSGAVLINI SLGLGEFAKT GWVAYPPLSE
LAYSPGVGVD YYIWALQISG IGTTLTGVNF IATVLKMRAP GMKLMQMPIF TWACTWANVL
IVASFPILTA VLGMLTLDRY LDFHFFTNDG GGNAMMYINL FWAWGHPEVY ILVLPAFGIF
SEVFSTFTSK RLFGYTSMVW ATGAISVLGF IVWLHHFFTM GSSANVNAFF GVMTMVIAVP
TGVKLFNWLF TIYRGRLRFT VPVLWSLGFM VTFTIGGMTG VLLALPGADY VLHNSLFLIA
HFHNTIIGGA VFGYMAGFAY WFPKAMGFTL NERLGKASFW CWQIGFYVAF MPLYVLGFMG
MTRRINQTDN PAWNFWLYFA VVGAFIILVG IILQFVQLYV SFRDREQNLD TTGDPWNGHT
LEWSTSSPPQ FYNFAQLDPV TDIDAFTDMK EKGTAYQRRE TYQPIHMPKN TASGIAMAAC
ITAMGFAAIW HIWWLAIVGF AGTFVLFLLR AYDNDVDYFV QPDEVARIEN AHLDNVARGR
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