| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0221 |
|---|
| Symbol | |
|---|
| ID | 4277955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 243681 |
|---|
| End bp | 244010 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638132975 |
|---|
| Product | cytochrome C oxidase subunit IV |
|---|
| Protein accession | YP_748922 |
|---|
| Protein GI | 114561409 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
|---|
| TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG CACATGCAAG CCACGGCGAA GGCGATTTTT CTGCCAGCGT TAAATCATAT
TTAGTCGGCT TTGTGTTATC GGTTGTATTA ACTGGTATTC CATTTTGGTC GGTGATGACG
CACCAGTTTG ACCACATGAC AACACTATGG GTTGTGGTGA TAACGGCGTT AGTGCAAATC
GTGGTGCACT TGAAATACTT CCTCCATTTA GACTTTTCTA AAGAAGGCAG AATCAATACA
TTCTCGTTCT TATTCACGGC CTTGATTATT GTCATGGTGG TGGGTTTGTC TGTGTGGATT
ATCTACGCAG CCAATGAATT GATGATGTAA
|
|---|
| Protein sequence | MSNAHASHGE GDFSASVKSY LVGFVLSVVL TGIPFWSVMT HQFDHMTTLW VVVITALVQI
VVHLKYFLHL DFSKEGRINT FSFLFTALII VMVVGLSVWI IYAANELMM
|
|---|
| |