Gene Sfri_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0218 
SymbolompR 
ID4277952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp240884 
End bp241609 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID638132972 
Productosmolarity response regulator 
Protein accessionYP_748919 
Protein GI114561406 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCAAG AAACCTCTAA GATTCTCGTT GTCGATGATG ACATGAGATT ACGTTCATTA 
TTAGAACGTT ACTTAATTGA GCAAGGCTTC CAAGTTCGTA GCGCTGCCAA TGCAGAACAA
ATGGATAGAT TACTTGAACG TGAAAATTTC CATTTATTAG TACTCGATCT GATGCTACCA
GGCGAAGATG GTTTGTCTAT TTGCCGCCGC TTACGCCAGC AAGAAAACCC AATCCCTATC
GTGATGCTGA CCGCCAAAGG CGATGAAGTT GATCGTATTA TTGGCCTAGA GCTTGGCGCT
GATGACTATT TACCTAAACC GTTTAATCCA CGTGAGTTAT TAGCGCGTAT TAAAGCGGTA
ATGCGTCGCC AAATTGCTGA AGTACCTGGT GCGCCTGCGC AACAAGAAGA AATGATTGAG
TTTGGCGAGT TTTCGCTAAA TTTAGCCACT CGTGAAATGT TCCATGGCGA TGAAAGCATT
GCACTTACCA GTGGTGAGTT TGCTGTGCTT AAAGTGCTGG TAAACCATCC TCGTGAGCCA
TTATCGCGCG ACAAATTGAT GAACCTTGCC CGTGGCCGTG ACTATTCAGC CCTTGAGCGT
TCAATCGATG TTCAGGTATC GCGCTTGCGT CGTTTAATTG AAAAAGACGC CGCTAACCCA
CGTTATATTC AAACAGTTTG GGGTTTAGGT TATGTGTTTG TGCCCGACGG CACCACGCGT
AAGTAA
 
Protein sequence
MGQETSKILV VDDDMRLRSL LERYLIEQGF QVRSAANAEQ MDRLLERENF HLLVLDLMLP 
GEDGLSICRR LRQQENPIPI VMLTAKGDEV DRIIGLELGA DDYLPKPFNP RELLARIKAV
MRRQIAEVPG APAQQEEMIE FGEFSLNLAT REMFHGDESI ALTSGEFAVL KVLVNHPREP
LSRDKLMNLA RGRDYSALER SIDVQVSRLR RLIEKDAANP RYIQTVWGLG YVFVPDGTTR
K