Gene Sfri_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0215 
Symbol 
ID4277949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp236893 
End bp237366 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content45% 
IMG OID638132969 
Productredoxin domain-containing protein 
Protein accessionYP_748916 
Protein GI114561403 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCTA CAGGACAATC TTTACCAAAA GCTACCTTAA GCCAGCTGAC AAAAGACGGC 
ATGGTTAATC ACGATGTTAC TGAGCTTTTT GCCGGTAAAA AAGTAGTATT GTTTGCAGTG
CCAGGTGCAT TTACACCAAC CTGTTCAGAA GCTCACTTAC CAGGTTTTGT AGTATTAGCC
GACGAGTTTA AAGCTAAAGG TGTTGACCTT ATCGCTTGTG TATCTGTTAA CGATGCATTC
GTAATGAAAG CGTGGGGCGA AGCCCAAAAT GCTTCTGAAT TAATGATGCT AGCCGACGGT
GATGCAAGCT TCGCTAAAGC GTTAGGCTTA GAAATGGACA CCGCTGGTTT TGGCGGCGTT
CGTTCACAAC GTTATGCGAT GGTGATCGAC AATGGCGTAG TGACTTTACT GAATGTTGAG
GAAGGTAAGT CATTTGAAGT CAGCACTGCT GAAGCGGTAA TGGCTGCACT GTAA
 
Protein sequence
MIATGQSLPK ATLSQLTKDG MVNHDVTELF AGKKVVLFAV PGAFTPTCSE AHLPGFVVLA 
DEFKAKGVDL IACVSVNDAF VMKAWGEAQN ASELMMLADG DASFAKALGL EMDTAGFGGV
RSQRYAMVID NGVVTLLNVE EGKSFEVSTA EAVMAAL