| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0212 |
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| Symbol | |
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| ID | 4277946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 233551 |
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| End bp | 235791 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638132966 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_748913 |
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| Protein GI | 114561400 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCC AAACAACAAC ACAATTATTG ATAGAGGGTG CAGGTTGTGC CAGCTGTGTT
GGCAAAATTG AGAAAGCCCT TAAAACAGTC GCGCAAGTAG AGCAGGCTGA AATGAACTTT
GCTGATCGCA GTGTGATGGT CACCGGAGAG GTTGACGTTG CTCGTTTACT TGATGCTGTT
GAGCAAGCCG GTTACCACGC AATTGTGATT AACGATCAAG GTGGTGCAGA TGCCATTGAT
GAGAAAGAAC AGGCCGATGC TGCCTACTAT AAAAGCTTAA TCAAACACAC AGTCGTTGCA
TTAGCAGTGG GTATTCCACT GATGATCTAT GGTTTATTGA TTGGTGACAT GACCGTTACC
AGCCCAATGC AACAGCTGGT TTGGGGCGCA ATTGGTGTGC TCACCTTAGG GATAATGTTT
GTCTCGGGTA AGCATTTTTA TACTGGCGCT TGGAAGTCAT TTATTAATCA TAGCGCCAAT
ATGGATACCT TAATCGCCTT AGGTACCGGA ACCGCCTGGG TTTATTCTAT GGTCGTGGTG
CTTGCGCCAG ATTTATTGCC ACAAATGGCG CGCCATGTTT ATTTTGAAGC AACCGCGATG
ATCATTGGTT TAATCAACCT TGGACTTGCG TTAGAGGTTA AAGCGCGCGG TAAAACCTCG
GCAGCCATTA AACGTCTTAT TGGGTTACAA GCTAAAACGG CTAGGGTGAT CCGCAATGGT
AAAGCGGTCG ATATCGATAT TGCTCTGGTG CAATTAAACG ATAAAGTCAG TGTTCGTCCA
GGTGAAAAAA TTCCTGTTGA TGGTGTGGTC GTTGAAGGCA GCAGCTTTAT TGATGAGTCG
ATGCTGACGG GTGAACCTAT TCCGGTTGAA AAAGGCATTA ACGATGACGT AGTCGCGGGC
ACATTAAATA AGCTAGGTTC ACTTACCTTC ACCACTACCC GAGTCGGTAA AGATACCGCC
TTGGCGCATA TTATTACTAT GGTTAAGCGG GCACAAAATT CCAAACCGCC CATTGGCCGT
ATGGCAGATG TGATTTCGGG CTATTTTGTT CCCGCTATGA TGATTATTGC CATTATTAGC
GCCATGGTAT GGCTCAATTT TGGTCCAGAA CCGTCAATGG GATACGCCAT CGTGTCGGCG
ATGACAATTT TAATCATCGC TTGTCCGTGT GCGTTAGGGT TAGCAACACC CATGTCGGTG
ATGGTGGGCG TAGGTAAAGC CGCTGAATCT GGCGTGCTTA TTCGTAATGG TGAAGCCCTG
CAAACGGCAT CGACCATTAC CACCATGATT TTAGATAAAA CCGGCACGAT TACCGAAGGC
GCGCCAAAAA TCACCGATAT CATAGTGGTC AATGGTCGCG AACAAGAGCA CGTATTGCAA
CTGGCGGCAA GTATTGAGCA ACATTCTGAG CATCCACTTG CACAGGCCGT AGTTCAAGCC
GCTGCGGATA AGGGATTAGC GTTATTCAAT GTTGAACAGT TTACTGCAAT AGCTGGTTTT
GGGGTTCAAG CCCAATATCA ATCAACACAG TTGTTATTTG GTAATGAAAA ACTAATGCGC
GAAAAAGGCA TTGCCTTAAG CGATTATCAA CAACAAGCAC AAGCATTAGC AGCAGAAGCC
AAAACGCCAA TGTATTTTGC TATCGACGGT GAACTCGCAG CAGTGATTGC AGTGGCTGAC
CCGATTAAAG CAGACTCTGT TGCCGCCATC GCAAGGCTTA AAAATAGTGG CATTAAGGTC
ATTATGCTTA CCGGCGATAA CCATGCAACA GCCGCAGCAG TGGCGGCCAA AGTGGGCGTT
GATGACTTTT TTGCCGATGT ATTACCACAA GATAAAGCCA ATAAAGTGGC CGAATTACAA
GCCTTAGGTG AGGTTGTGGG TATGACCGGC GATGGCATTA ATGATGCTCC AGCGTTGGCT
CTGGCTAATG TCGGCTTTGC CATAGGCACC GGAACAGACG TGGCGATTGA AAGTGCCGAT
ATAACGCTAA TGCGAGGATC GCTACACGGT TTGGCAGATG CCATCGCGGT GAGTAAAGCG
ACGTTAGGCA ACATTAGGCA AAATCTGGTT GGTGCGTTTA TTTACAATAT GGCGGGTATT
CCGCTCGCTG CAGGGGTGTT ATTTCCGGTA TTTGGCGTAT TGCTTAACCC AGTAGTTGCC
GGTGCTGCAA TGGCATTTTC ATCATTAACC GTGGTGACCA ATGCCAACCG TTTACGCTTT
TTTACCCCTC AACAACACTA G
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| Protein sequence | MNTQTTTQLL IEGAGCASCV GKIEKALKTV AQVEQAEMNF ADRSVMVTGE VDVARLLDAV
EQAGYHAIVI NDQGGADAID EKEQADAAYY KSLIKHTVVA LAVGIPLMIY GLLIGDMTVT
SPMQQLVWGA IGVLTLGIMF VSGKHFYTGA WKSFINHSAN MDTLIALGTG TAWVYSMVVV
LAPDLLPQMA RHVYFEATAM IIGLINLGLA LEVKARGKTS AAIKRLIGLQ AKTARVIRNG
KAVDIDIALV QLNDKVSVRP GEKIPVDGVV VEGSSFIDES MLTGEPIPVE KGINDDVVAG
TLNKLGSLTF TTTRVGKDTA LAHIITMVKR AQNSKPPIGR MADVISGYFV PAMMIIAIIS
AMVWLNFGPE PSMGYAIVSA MTILIIACPC ALGLATPMSV MVGVGKAAES GVLIRNGEAL
QTASTITTMI LDKTGTITEG APKITDIIVV NGREQEHVLQ LAASIEQHSE HPLAQAVVQA
AADKGLALFN VEQFTAIAGF GVQAQYQSTQ LLFGNEKLMR EKGIALSDYQ QQAQALAAEA
KTPMYFAIDG ELAAVIAVAD PIKADSVAAI ARLKNSGIKV IMLTGDNHAT AAAVAAKVGV
DDFFADVLPQ DKANKVAELQ ALGEVVGMTG DGINDAPALA LANVGFAIGT GTDVAIESAD
ITLMRGSLHG LADAIAVSKA TLGNIRQNLV GAFIYNMAGI PLAAGVLFPV FGVLLNPVVA
GAAMAFSSLT VVTNANRLRF FTPQQH
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