| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0209 |
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| Symbol | |
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| ID | 4278135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 231035 |
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| End bp | 231916 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132963 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_748910 |
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| Protein GI | 114561397 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTACGC GTTCAGATGA TTTAGATATA TTGCTGATGG TGGTCGACAG CGGCGGGTTT
TCTGCAGCGG CCGATGCACT CAATATTCAG GTTGCACGAG TGTCACGCGC GGTAAGTAAA
ATAGAGCAAC AGCTCGGGGT CACCATTCTC AATCGCACCA CTCGGCGTGT TGAGTTAACC
GATGAAGGCC GCCAATTTGT TGAATCTGTT CGGGGTGGAT TACAACAATT ACAACGCGCA
GAAGATGAAC TCGTACGTCG TGGTGAACTA CCGCAAGGAC GTTTGCGTGT GGACGCGGCA
AGTCCGTTTG TGTTTCATCA ATTAGTGCCT TTGATGAAAG ACTTTCGCGC CGCTTATCCA
GACATTGAAT TAGCATTGAC CTCGAACGAG GGCTATGTCG ATTTACTTGA AAAGCGTACC
GATGTGGCCA TTAGAATCGG TAAGCTGGCA GACTCAACCT TGCATGCTCG ACCATTAGGT
AAAAGTGCCT TACATATTGT TGCCTCCGCT GAGTATTTAG CGCGTAGAGG TGTGCCACAA
AAAGTATCTG ATTTGGCTTG CCACGAGTTA CTTGGGTTTA CCGAACCTAA AATATTGAAT
CACTGGCCGC TAAAAGGTTG CGATGTTATT ACCCCTACCA TCAGCACCAG CAATGGAGAA
ACCTTGCGTC AACTAGCACT GGCAGGTAAT GGCATTGCGT GTCTTTCAAG TTTTATGATT
AATGATGATC TCGCGGCGGG TCGGTTAGTG CCCATACTTC AGTCGGAGAA GTTTACTCAC
ATAGAACGTG AACAAGTGAA TGCGGTGTAT TACAAATCGT CTATTGTGGC GCGACGTATT
TCTGCATTTA TTGAGTTTAT TCAACCAAGA TTAACCTTAT AA
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| Protein sequence | MLTRSDDLDI LLMVVDSGGF SAAADALNIQ VARVSRAVSK IEQQLGVTIL NRTTRRVELT
DEGRQFVESV RGGLQQLQRA EDELVRRGEL PQGRLRVDAA SPFVFHQLVP LMKDFRAAYP
DIELALTSNE GYVDLLEKRT DVAIRIGKLA DSTLHARPLG KSALHIVASA EYLARRGVPQ
KVSDLACHEL LGFTEPKILN HWPLKGCDVI TPTISTSNGE TLRQLALAGN GIACLSSFMI
NDDLAAGRLV PILQSEKFTH IEREQVNAVY YKSSIVARRI SAFIEFIQPR LTL
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