| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0208 |
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| Symbol | |
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| ID | 4278134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 229640 |
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| End bp | 230842 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132962 |
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| Product | major facilitator transporter |
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| Protein accession | YP_748909 |
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| Protein GI | 114561396 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTAG CTTTACTCGC ATTGACGCTT AGCGCCTTTG CTATTGGAAC CACCGAATTT
GTCATTGTGG GATTAATCCC CACAATGGCA CAAGACCTTA ACGTATCATT ACCATCGGCT
GGCTTATTGG TCAGTCTTTA CGCATTAGGT GTCGCCATTG GCGCACCAGT ACTCACCGCA
TTAACCGGTA AATGGAATCG CAAACACGTA TTGCTGGCGG TAATGAGTTT ATTTGTTGCG
GGTAATCTAT TGGCTTGGCA AGCGCCCGGT TACGAAACCT TAATCGCTGC ACGCATTATC
ACTGGGTTAG CCCACGGAGT GTTTTTCTCT ATTGGCTCAA CCATTGCCAC TGGGTTAGTA
CCCAAAGAAA AAGCCGCCAG TGCGATTGCC ATTATGTTTA CGGGGTTAAC CGTCGCCTTA
GTGACAGGCG TCCCTTTGGG CACCTATATT GGCCAGACCT TTGGCTGGCA AGCCACTTTT
TTAACTGTCG CAATTCTTGG ATTTGTAGCC TTGATTGGCA GTAGCTTGTT GGTTCCTAAT
AATTTACCTC AGCCACCCGC GGCAAAATTA TCATCGCAAT TAAAAGTACT CACTCAACCA
CGGTTATTAC TGGTCTATGC TATTACCGCA TTAGGTTATG GCGGCACATT TACGGCCTTT
ACTTTTTTAG CCCCCATTTT AGAGCAAGTG TCTGGTTTTG AATCTCAATC TATTGGCTTA
ATCATGTTGG TGTACGGGGT ATCGGTCGCT ATTGGTAATA TTTGGGGCGG AAAAATGGCC
GATAAAATGG GCCCAATTAA AGCGTTAAGT ATTATTTTCA GCGGTCTTGC GACCATATTA
GTGATATTTA ACTTTACTGC GGTTAACCCT ATTGCCGCTG TGATCACCAT TTTGGTCTGG
GGCGCGTTTG CATTTGGTAA TGTACCAGGG CTACAAGTTT ACGTAGTTTC ACTTGCACAG
AAGTACACAC CCGACGCCGT TGATGTGGCT TCAGGATTAA ATATTGCCGC TTTTAATGTC
GGTATTGCAC TTGGGTCTTG GGGTGGCGGG CTGATTGTGG CTAACGCTGG CCTAATGCAT
ACACCTTGGG TTGGTGCGGT GATTGTGGTT ATTGCCCTAG CATTAACACG TTTCAGTGGC
TCACTAGACA AGAAAACTAA CGCTAGCAAG AATGCTCAAG TGAGTATTCA AGCAAGTAGT
TAA
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| Protein sequence | MPLALLALTL SAFAIGTTEF VIVGLIPTMA QDLNVSLPSA GLLVSLYALG VAIGAPVLTA
LTGKWNRKHV LLAVMSLFVA GNLLAWQAPG YETLIAARII TGLAHGVFFS IGSTIATGLV
PKEKAASAIA IMFTGLTVAL VTGVPLGTYI GQTFGWQATF LTVAILGFVA LIGSSLLVPN
NLPQPPAAKL SSQLKVLTQP RLLLVYAITA LGYGGTFTAF TFLAPILEQV SGFESQSIGL
IMLVYGVSVA IGNIWGGKMA DKMGPIKALS IIFSGLATIL VIFNFTAVNP IAAVITILVW
GAFAFGNVPG LQVYVVSLAQ KYTPDAVDVA SGLNIAAFNV GIALGSWGGG LIVANAGLMH
TPWVGAVIVV IALALTRFSG SLDKKTNASK NAQVSIQASS
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