| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0199 |
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| Symbol | |
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| ID | 4278125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 220210 |
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| End bp | 222513 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638132953 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_748900 |
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| Protein GI | 114561387 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA TGCCTAAACG TGGATCGGCT GGTATAACCC GCCGTGGTTT TTTAATTGCG
ATGACCGCTG TAGGTGTCAG CTTTGGTTTT CCTCGCCATT TGATGGCGGC AATGGATCCT
GCTAGCCCAG ACGGTAAAGT ACTCCCAAGC GAAGGCGATA TTTACGAACC GTCTTTATGG
TACTCAATCG ATACCGCAGG CAAAATTAAA GTCAACATTA TGCGCTCAGA AATGGGCCAA
CATGTCGGCA CTGCTATTGC GCGTATTCTT GCTGATGAAC TAGAAGCTTT ATGGGATGAT
GTCGAGATTA TCCATGTCGA CAGTGACCCG CGTTGGGGTT ACATGGTTAC CGGCGGCAGT
TGGTCTATTT CGCAAAGCTG GCCAGTTTAC CGTCAAGCGG GTGCTGCTGG CCGTACAGCG
TTAATTGAAG CTGCGGCTAA AAAATGGGGT ATTGCAGCAA AAGACTGTAA AGCCAGTAAC
GGTAAAATAA TCTCAAGTAA AGGCGAAATG TCTTACGGTG AGTTAGTCAC CCTAGGCTTA
ACACGTCAGT TTACTGAAGA AGAACTTAAA ACCCTGCCAT TGAAGCCGAA TGCCGATCTT
AAACTGGTTG GCCAACAGGT GACGTCTCTT GATATTGCCA ACAAGACTAA CGGTAAAACC
ATATTTGGTA TCGACGCGAA AGTTGATGGC ATGGTGTACG CCAACCCTAT TTTGCCTCCT
ACACGTTATG GCTCCAAAGT GGTTAAGTTT GACGACTCTG CTGCAAAAGC CGTTAAGGGT
TATCAACAAA CTATCATACT AGATGATGCC AGTGGCAGTG TGCCAGGTTG GTTAATGGTT
ATCGCCAGCA GCTTTAATGC GGCCCAAAAA GCCTCGAAGC TCGTGAAAGT AACATGGGAC
GCAGGTAAAA CGGCCAACGT GTCTGAAGCA GACATTATTG CTCATGGTAA GCGATTACTT
GGCGACCAAA CCAAAGGCAG TATTTTAGAC ACAGGCAATA CTGACACTGG TCCAGTATTT
GCGAGTGCAA AAAGTACCAT TGCAGAAGAA TACATCACCA GCACGGTACT CCATGCACAA
ATGGAACCGC TTAATGCACT GGTATTTAAA AACCAAGACG GCATATGGGA AGTGCATTCA
GGTTGTCAGT GGCAATCGCT TACCCTTCCC GTATTGGCCA CGGCATTAGG CGAAGAAGAA
GCTAACATTG TGATTCGTAG CTACATGTTA GGCGGTGGCT TTGGCCGCAG ACTTAACGGC
GATTACACCA TTCCAGCTGC GTTGACCTCT AAAGCGTTAG GCGGTAAACC CGTTAAAATG
GTGATGATGC GTCCACAAGA CATGTTATTT GATAGCGCGC GATCTGCATC TGTTCAACAG
TTAAAAATGG CGTTTGATGA CAAAAAAGCG GTTACCGCAA TGGAACATCA CGCCACAGCA
GGTTGGCCAA CTCAAGTATT AGCACCAGGG TTTATGCCAA AAGGCACTAA TGGCGAACCA
TTTGATCCGT TTTCGATTGC CGGAGCAGAC CATTGGTACA CTGTTGGCGC TCAAAAAGTG
CGTGCTGTAT CGAATGACCT TGCGATTGCA ACGTTCAGAC CGGGTTGGTT ACGTTCAGTT
GGACCTGGCT GGACAGGTTG GGCTGTTGAA AGCTTTATGG ATGAAGCTGC GCATCACGCG
GGTAAAGATC CATTACAGTT CCGCCTCGAC ATGCTAATTG CCGAAGGCCG AAATGCTGGG
AGCACACCCG TTGCCGAAGG TGGCGCTGCT CGCCAAGCCG CAGTATTGAA AAAAGCTGCC
GAGATGATTG GCTGGGGCAC GCCACAAGCC AAAGATACAG GGCTTGGCAT TGCATCAACC
TTTGGCCAAG AACGTGATAT GCCAACCTGG GTATCGTGCG CAGTACAAGT GCATGTGGAT
AAAAGCAACG GTATTGTCAA TGTGCAGAAA TTGGTTATCG CCATCGATGC CGGCATTATT
GTTGATCCTA ACGGCGCAGA GGCCCAATGC CAGGGTGCTG CATTGTGGGG ATTATCTATG
GCGTTGTATG AAGGTACTGA ACTGCTTAAT GGTCAGTATA AAGACTCAAA CTTTGATACT
TATACTCCGC TGCGCTTAGG TCAGACACCG GAAGTTATCA TCGAATTTAT CCCAAGCAAA
ATGCCACCAT CTGGCTTAGG TGAACCGGCT GTAACCCCTG TTGCTCCAGC GATTGCTAAT
GCAATCTATC AAGCTGTGGG TGTACGGTTA CGTAAAATTC CGATGAAACC TAGCGAGCTA
AAAAGCGCAT TAACTAACGC GTAA
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| Protein sequence | MSRMPKRGSA GITRRGFLIA MTAVGVSFGF PRHLMAAMDP ASPDGKVLPS EGDIYEPSLW
YSIDTAGKIK VNIMRSEMGQ HVGTAIARIL ADELEALWDD VEIIHVDSDP RWGYMVTGGS
WSISQSWPVY RQAGAAGRTA LIEAAAKKWG IAAKDCKASN GKIISSKGEM SYGELVTLGL
TRQFTEEELK TLPLKPNADL KLVGQQVTSL DIANKTNGKT IFGIDAKVDG MVYANPILPP
TRYGSKVVKF DDSAAKAVKG YQQTIILDDA SGSVPGWLMV IASSFNAAQK ASKLVKVTWD
AGKTANVSEA DIIAHGKRLL GDQTKGSILD TGNTDTGPVF ASAKSTIAEE YITSTVLHAQ
MEPLNALVFK NQDGIWEVHS GCQWQSLTLP VLATALGEEE ANIVIRSYML GGGFGRRLNG
DYTIPAALTS KALGGKPVKM VMMRPQDMLF DSARSASVQQ LKMAFDDKKA VTAMEHHATA
GWPTQVLAPG FMPKGTNGEP FDPFSIAGAD HWYTVGAQKV RAVSNDLAIA TFRPGWLRSV
GPGWTGWAVE SFMDEAAHHA GKDPLQFRLD MLIAEGRNAG STPVAEGGAA RQAAVLKKAA
EMIGWGTPQA KDTGLGIAST FGQERDMPTW VSCAVQVHVD KSNGIVNVQK LVIAIDAGII
VDPNGAEAQC QGAALWGLSM ALYEGTELLN GQYKDSNFDT YTPLRLGQTP EVIIEFIPSK
MPPSGLGEPA VTPVAPAIAN AIYQAVGVRL RKIPMKPSEL KSALTNA
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