Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0197 |
Symbol | |
ID | 4278123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 217648 |
End bp | 218703 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638132951 |
Product | hypothetical protein |
Protein accession | YP_748898 |
Protein GI | 114561385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA AAAAAATCAT TATAACAATA GCCCTACTCG CTACGGCAGT AGGGTTTTGG GTTGACACTT CTGAGTCGGC ACTTGAGCCA CCTCAGAGTG CCGCTGTTAT CGAGCAAGAT GATACTGCGC CAACCAAGCC GAAAGTGGTA AAATCCATGC CAGCTAAAAC GATGACCGTG GTTGAAAAGC TTCCACAACC GATCAGTAAT AGTTTTCAGC TTATGGCAGA GGCTTATGCT AGCGAACTTG AGCTGCCATC TTACTCAATG CCTTTATCGG TTGATGATAC GCACTTACTT AACCCCAATG CTTACATTCC TCAGCCGGTG CAACTCCAAG ATGGAGCCAG TGCTAGCATT GTGTTGCCTA AGTATCGTTT CAGTTTTCCT GAACCAGTGG TCATTAATCT TGAAGTTAAT GGCTTGCTCG TTACTGGGGC GAGTGCTGCA TTACACAGCG AACTTACAAG TGGTTCGGAG CCGTTAATTA GCGAAACCAT GCTAGGTGCC GATGGCAAAT GGGCGATACA ACTGAATGCT GAAGAGGATT GGAATGGTCC AATGGAGGTC AGTGTTACCT TTCGCGCTAA GGGCAAAAAG CAAACGTTAA AAACAGGCAT AGAATATAGT CATCCTACGG CAACCATAAC CGGAGTGGGG GATATCCGCG CTGAAGGTAG TGATATGTTG ATACCGGTTA AATTGGATGT TGAGCAAGCG GGTTATTATC GTTTACGGGC CAATCTATAT ACAGCAGATA AGCAGCCGAT TGCCTTGCTA ACGGATTCCG ACAAGCTGAC TGAAGGCTCT GTGGTACTGG ATCTTAAAGC CTATAAAGGG GTGTTAGCGC AATATAAAGG CCCTTATGTT CTGAGTACAT TTGTATTGGA GCGCCGCCCA GCAGTACCCG GTGAATTAAC TCAGTACGGC CACAGTGAGG AACCTGCCTA CGAGTTAGGC GATTTTGCTG TTGAGTCGCT ATCTGATGAG CCATGGCAAC CCGATGAGCA AGAAATGCAG CGACTTGAGT TTTTGCAAAA AATGGCAGCA GACTAG
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Protein sequence | MKYKKIIITI ALLATAVGFW VDTSESALEP PQSAAVIEQD DTAPTKPKVV KSMPAKTMTV VEKLPQPISN SFQLMAEAYA SELELPSYSM PLSVDDTHLL NPNAYIPQPV QLQDGASASI VLPKYRFSFP EPVVINLEVN GLLVTGASAA LHSELTSGSE PLISETMLGA DGKWAIQLNA EEDWNGPMEV SVTFRAKGKK QTLKTGIEYS HPTATITGVG DIRAEGSDML IPVKLDVEQA GYYRLRANLY TADKQPIALL TDSDKLTEGS VVLDLKAYKG VLAQYKGPYV LSTFVLERRP AVPGELTQYG HSEEPAYELG DFAVESLSDE PWQPDEQEMQ RLEFLQKMAA D
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