Gene Sfri_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0185 
Symbol 
ID4277587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp193486 
End bp194025 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content42% 
IMG OID638132935 
Productredoxin domain-containing protein 
Protein accessionYP_748886 
Protein GI114561373 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000121029 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACTG CAAGTGTGGC TAATGCATAC CCCGGCATGC AAGCTGCGGC TAAGCAAACC 
TCTGAATCAA CTCTCGAACG CATAAATATA TTGCCGCAAC CATTCCCAAT TGCTCTGGTC
GATTTTACTA ATCTCGTTGG TCAGTCGGTT AACTTTGAAC AATATAAGGG TAAAGTGGTT
GTTGTTAATC TTTGGGCTAC TTGGTGTCCG CCGTGTGTAA GAGAACTTCC TGCACTCAAT
CGATTAAATC AAACTCTAAA TGCAGAACAT TTTGCATTAT TGCCCATTTC TATTGATGCA
GAAGCTGTGG CTATTGTGCA ACCATTTTTG GAGTCTCTTG GATTAGGCGA ATTTAATTCG
TATTTCGATC CGCAACAACA ACTACGTGAT GTCTTTCCGC TTGATACGAT ACCTGCAACA
TTTATCTTAA ATGAGCAAGG TGAGCTGGTG GCTTATGTAC GTTCGTATGT CGATTGGGAT
GATACAAGTG TGGCTACCTT CCTTGAACAG TTTCGCCAGA ACGCTAAAGA AGTACAATAA
 
Protein sequence
MGTASVANAY PGMQAAAKQT SESTLERINI LPQPFPIALV DFTNLVGQSV NFEQYKGKVV 
VVNLWATWCP PCVRELPALN RLNQTLNAEH FALLPISIDA EAVAIVQPFL ESLGLGEFNS
YFDPQQQLRD VFPLDTIPAT FILNEQGELV AYVRSYVDWD DTSVATFLEQ FRQNAKEVQ