Gene Sfri_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0184 
Symbol 
ID4277586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp192943 
End bp193425 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content40% 
IMG OID638132934 
Productcytochrome C biogenesis protein 
Protein accessionYP_748885 
Protein GI114561372 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID[TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000331136 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA TATTTAAAAT GATGGTGGCT TGTACGAGTT TACTTTTTAC TCTGACGGTA 
ATGGCGACAC CTGTTGATAC TTATGAATTT CAATCGGCAG ATAATCAACA AAGAGCATTG 
TCACTAGCAC ACCAATTGCG TTGCCCACAG TGTCAGAATC AAAACTTAGT CGATTCAAAC 
TCTCCGGTTG CCCAAGATTT ACGTCTTGAG GTGTATACCA TGGTCGATAG TGGTAAGTCA 
GATTCAGAGA TTATTGAATT TATGACCAGC CGCTATGGCG ATTTTGTCTT GTACAATCCA 
AAGTTAGACT CGAAAACTTA TATTCTATGG CTTGGTCCAT TTGGATTACT TGTTTTGGGT 
CTCTTTATTG GTTTTATCTT CGTGCGTAAG CAGCGTATCC AGGCAACAGA ATCGACAACC 
TTGTCGACAG AGCAACAAGC CGAGTTAGAT GCGCTATTAA ATCGTAGTAA GACAACTAAG 
TAA
 
Protein sequence
MKFIFKMMVA CTSLLFTLTV MATPVDTYEF QSADNQQRAL SLAHQLRCPQ CQNQNLVDSN 
SPVAQDLRLE VYTMVDSGKS DSEIIEFMTS RYGDFVLYNP KLDSKTYILW LGPFGLLVLG 
LFIGFIFVRK QRIQATESTT LSTEQQAELD ALLNRSKTTK