| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0183 |
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| Symbol | |
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| ID | 4277585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 192389 |
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| End bp | 192943 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638132933 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_748884 |
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| Protein GI | 114561371 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000350025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAGT TTGTACTGTT TATACCTTTG GTTATATTTT TGGGTATGGG CGTGTTTTTA
TACAAAGGAT TATTTCTAAA TCCTAAAGTG CTTGATTCTG CATTAGAAGG AAAGCCAGTT
CCGGCTTTCC AACTTGAGCG CTTAGAAGTG CCTAGTGAAG TGTTAACTGA GAAAGATCTT
CCAGCAAAAG TGTCTATGTT GAACTTTTGG GCAACTTGGT GTCCGGCATG TAAGTATGAA
CATCCTTATT TGATGATGCT GTCTAAACGT AACTTATTAC CTATATATGG TATCAATTAT
CGTGACGAGA GAGCATTAGC TGTTAAGGAG TTAACTACTC AAGGTGATCC ATACACAGTT
AACATCTTTG ACAAAGATGG TCGCTTAGGT CTTGATCTTG GAGTTTATGG AGCACCGGAA
ACTTTTATCG TCGACCACAA CGGTATTATT CGTTATCGCT ATGCCGGTCC TATAGATCAA
ACAGTATGGA CACAAACCTT GTATCCAATG ATCCAGCAAT TACAAGCTGA AGCTAAAGTC
GATGGAGCAT CGTAA
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| Protein sequence | MKKFVLFIPL VIFLGMGVFL YKGLFLNPKV LDSALEGKPV PAFQLERLEV PSEVLTEKDL
PAKVSMLNFW ATWCPACKYE HPYLMMLSKR NLLPIYGINY RDERALAVKE LTTQGDPYTV
NIFDKDGRLG LDLGVYGAPE TFIVDHNGII RYRYAGPIDQ TVWTQTLYPM IQQLQAEAKV
DGAS
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