Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0180 |
Symbol | |
ID | 4277582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 188342 |
End bp | 188635 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638132930 |
Product | cytochrome c, class I |
Protein accession | YP_748881 |
Protein GI | 114561368 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.245077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TGTTAGCAAT GACTGCAGTA GCTGCCTTAA CTTTGTCTGC AAATGTATTT GCTCAAGAAG GTGAAGCTAT TTATAATAAA GCGTGTCAAG TATGTCACAG CATGGGTGTG GCCGGTGCGC CTAAAGTTCA TGACACTGCG GCATGGGAAC CACGTCTAGC AAAAGGTTTA GATGCCTTAG TGGGTTCAGT TAAGTCTGGT TTAAACGCAA TGCCACCAGG TGGTATGTGT ACTGACTGTA CTGATGAAGA TTACAAAAAC GCAATTCAGT TTATGTCTAA GTAG
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Protein sequence | MKKLLAMTAV AALTLSANVF AQEGEAIYNK ACQVCHSMGV AGAPKVHDTA AWEPRLAKGL DALVGSVKSG LNAMPPGGMC TDCTDEDYKN AIQFMSK
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