| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0177 |
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| Symbol | |
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| ID | 4277579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 185925 |
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| End bp | 186671 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132927 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_748878 |
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| Protein GI | 114561365 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAT GGTTACATTC TTACGCAGAC CCTGAACGGG CATATAAATT GTCAGGCACA
TTGTTGCCTT GGTTTAGTAC ACTGGCAATA TTGCTGGTTG GAACAGGCAG TATTTGGGGT
TTATTGTTTG CCCCAACAGA TTACCAACAA GGTGACAGTT ACCGAATCAT CTTTATCCAT
GTACCTGCTG CGTCTATGTC AATGGCCGCT TATATGGGTA TGGCTATTGC TTCATTTATT
GGCTTAGTTT GGCAGATAAA GTCGGCAGAT TGGGCCGCTG CAGCAATTGC TCCTATTGGC
GCCGTAATTA CCTTTATTGC CTTATTAACA GGTGCTGCAT GGGGTAAACC TATGTGGGGA
ACTTGGTGGG TATGGGATGC ACGTTTGACA TCTGAATTGG TATTGCTGTT TCTTTACCTT
GGTGTGATCT CACTGTATGC ATCATTTGAA GATAAAGTCC TCGCCGCTAG GGCTTCTGGA
ATTCTGGCGA TTGTAGGTGT AATTAATATA CCAATTATTA AATACTCCGT GGATTGGTGG
AGTAGTTTAC ATCAACCATC TACCATTAAA ATCACAGAAA AATCAACGAT GTCGACTGAT
ATGTTATACC CACTGCTAAT TAACATTTTT GGCTTTGGTA TGATGATTGG GGCGATTACT
TTGATCCGTT ATAGAACAGA GATCCTTGCG CGCAATGGTA TGCGCCCTTG GGTGAGAGAT
TTAGCTACAG CAGAGGAGGC AAAATAA
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| Protein sequence | MWKWLHSYAD PERAYKLSGT LLPWFSTLAI LLVGTGSIWG LLFAPTDYQQ GDSYRIIFIH
VPAASMSMAA YMGMAIASFI GLVWQIKSAD WAAAAIAPIG AVITFIALLT GAAWGKPMWG
TWWVWDARLT SELVLLFLYL GVISLYASFE DKVLAARASG ILAIVGVINI PIIKYSVDWW
SSLHQPSTIK ITEKSTMSTD MLYPLLINIF GFGMMIGAIT LIRYRTEILA RNGMRPWVRD
LATAEEAK
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