| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0174 |
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| Symbol | rplQ |
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| ID | 4277244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 183783 |
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| End bp | 184178 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638132924 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_748875 |
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| Protein GI | 114561362 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000106796 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTA AACCGCAACA GCAGTCATCG CCAAGCTATG
TTCCGTAACA TGGCTTGTTC AATAGTTCGT CATGAGATTA TCAAGACAAC TGTAGCTAAA
GCGAAAGAAC TGCGTCGCGT TGTTGAACCT CTAATAACAC TTGCTAAAGT TGACAGCGTT
GCAAATCGCC GTTTAGCTTT CGCTCGTACC CGCGACGCTG AAGTTGTAGG TAAGTTATTT
ACTGAATTGG GTCCACGCTT CCAGGAACGT CCTGGTGGTT ACACTCGTAT TCTTAAGTGC
GGTCTACGTA CCGGTGATAA AGCCCCAATG GCTTACATCG AGTTAGTAGG TCGTCCTGAA
GCTGCTGAAG CTGTTGAAGT TGAAGCTGCT GAGTAA
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| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMACSIVR HEIIKTTVAK AKELRRVVEP LITLAKVDSV
ANRRLAFART RDAEVVGKLF TELGPRFQER PGGYTRILKC GLRTGDKAPM AYIELVGRPE
AAEAVEVEAA E
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