Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0167 |
Symbol | rplO |
ID | 4277237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 179273 |
End bp | 179707 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638132917 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_748868 |
Protein GI | 114561355 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000446148 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTAA ATACTCTATC TCCAGCAGCA GGTTCTAAAT CTGCTCCTAA GCGTGTAGGC CGTGGTATCG GTTCAGGTTT AGGTAAAACA GCGGGACGTG GCCATAAAGG TCAGAAGTCT CGTTCAGGCG GCGGTGTTCG CGTCGGTTTC GAAGGTGGTC AAATGCCACT TAAGATTCGT TTACCTAAGT TTGGCTTTAC TTCGCGTCGC GCTTTGGTAA CAGCTGAAGT TCGTTTACTC GAACTAGCAA AAGTTAACGG TGATGTTGTC GATTTGAATG CACTGAAAGA TGCGAACGTT ATTACTCGCA ACATCCAGTT TGCGAAAATC GTTCTTTCAG GTACCATTGA CCGCCCAGTG ACTGTAAAAG GTCTCAAGGT AACCAAAGGT GCTCGTGCAG CTATTGAAGC TGCCGGTGGC AAGATCGAGG AATAA
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Protein sequence | MRLNTLSPAA GSKSAPKRVG RGIGSGLGKT AGRGHKGQKS RSGGGVRVGF EGGQMPLKIR LPKFGFTSRR ALVTAEVRLL ELAKVNGDVV DLNALKDANV ITRNIQFAKI VLSGTIDRPV TVKGLKVTKG ARAAIEAAGG KIEE
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