Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0164 |
Symbol | rplR |
ID | 4277234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 178212 |
End bp | 178562 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638132914 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_748865 |
Protein GI | 114561352 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000393555 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA AAACATCTCG CTTACGTCGC GCGTTACGTG CACGTAAGAA GATCCAAGAG CTGGGCGTGA ATCGTCTGGT TGTACATCGT ACACCGCGTC ACATTTATGC TCAGGTGATC AATCCTGAAG CTCAGGTGTT GGCAGTTGCT TCAACCGTGG AAAAAGCGGT TAAAGAGCTA CTAAAGAGTA CCGGTAACGT TGATGCGGCT AAAGCAGTAG GTAAAATTGT TGCTGAGCGT GCGATCGAGA AGGGCGTAGC AACAGTTGCG TTCGACCGTT CTGGTTTCAA GTATCATGGT CGTGTAGCTG CACTAGCAGA TGCCGCTCGT GAAGCTGGCC TGAAGTTCTA A
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Protein sequence | MDKKTSRLRR ALRARKKIQE LGVNRLVVHR TPRHIYAQVI NPEAQVLAVA STVEKAVKEL LKSTGNVDAA KAVGKIVAER AIEKGVATVA FDRSGFKYHG RVAALADAAR EAGLKF
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