Gene Sfri_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0164 
SymbolrplR 
ID4277234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp178212 
End bp178562 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID638132914 
Product50S ribosomal protein L18 
Protein accessionYP_748865 
Protein GI114561352 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000393555 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA AAACATCTCG CTTACGTCGC GCGTTACGTG CACGTAAGAA GATCCAAGAG 
CTGGGCGTGA ATCGTCTGGT TGTACATCGT ACACCGCGTC ACATTTATGC TCAGGTGATC
AATCCTGAAG CTCAGGTGTT GGCAGTTGCT TCAACCGTGG AAAAAGCGGT TAAAGAGCTA
CTAAAGAGTA CCGGTAACGT TGATGCGGCT AAAGCAGTAG GTAAAATTGT TGCTGAGCGT
GCGATCGAGA AGGGCGTAGC AACAGTTGCG TTCGACCGTT CTGGTTTCAA GTATCATGGT
CGTGTAGCTG CACTAGCAGA TGCCGCTCGT GAAGCTGGCC TGAAGTTCTA A
 
Protein sequence
MDKKTSRLRR ALRARKKIQE LGVNRLVVHR TPRHIYAQVI NPEAQVLAVA STVEKAVKEL 
LKSTGNVDAA KAVGKIVAER AIEKGVATVA FDRSGFKYHG RVAALADAAR EAGLKF