Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0160 |
Symbol | rplE |
ID | 4277230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 176385 |
End bp | 176924 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638132910 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_748861 |
Protein GI | 114561348 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000387746 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAC TGCATGATAA ATATCAAGAG ACTGTAGTTG CTGAACTAGC TAAAAAGTTC GGCTACAGCA GTGTCATGCA AGTCCCTCGG ATTGAAAAAA TCACCCTAAA CATGGGTGTG GGCGAAGCTG TTGCAGATAA GAAAGTTATG GAGCATGCGC TCCGTGACAT GACTGCAATC GCTGGCCAGA AACCAATTGT AACTGTTGCT CGTAAATCAG TTGCTGGTTT TAAAATCCGT GAAGGCTACC CTATTGGCTG TAAAGTGACC CTACGCGGTG AGCGTATGTG GGAATTTTTA GAGCGTTTAG TTGACATTGC AATACCACGT ATTCGTGATT TCCGAGGCTT AAGCGCTAAA GCGTTTGACG GCCGTGGTAA TTACGCAATG GGCGTGCGTG AGCAGATCAT CTTCCCAGAA ATCGATTATG ATAAAATCGA TAAAATTCGT GGTATGGATA TTGTTATCAC TACTACTGCG AAGAATGATG AAGAAGGTCG TGCTTTGTTA GACGCTTTTA ACTTCCCATT CAAGAAATAA
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Protein sequence | MAKLHDKYQE TVVAELAKKF GYSSVMQVPR IEKITLNMGV GEAVADKKVM EHALRDMTAI AGQKPIVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLVDIAIPR IRDFRGLSAK AFDGRGNYAM GVREQIIFPE IDYDKIDKIR GMDIVITTTA KNDEEGRALL DAFNFPFKK
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