| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0159 |
|---|
| Symbol | rplX |
|---|
| ID | 4277229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 176057 |
|---|
| End bp | 176371 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638132909 |
|---|
| Product | 50S ribosomal protein L24 |
|---|
| Protein accession | YP_748860 |
|---|
| Protein GI | 114561347 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0198] Ribosomal protein L24 |
|---|
| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000158735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTA AAATCCGTCG TGAAGACGAA GTAATTATAT TAGCAGGTAA AGACAAGGGT
AGCCGCGGTA AGGTTTCTCA AGTTCTACCT ACTGGTAAGT TAATTGTTGA AGGCTTTAAT
CTTGTTAAAA AGCACCAGAA ACCTAACCCT CAATTGGGTG TTGCTGGCGG CGTTATCGAG
AAAGAAGCAC CGATGCAAGC ATCAAACGTT GCGATCTTTA ACCAAGCCAC AGGCAAGGCA
GATCGTGTTG GTTTCCGATT TGAAGACGGC AAAAAAGTCC GTTTCTTTAA ATCGAACAGC
GAACTCGTTA AGTAA
|
|---|
| Protein sequence | MAAKIRREDE VIILAGKDKG SRGKVSQVLP TGKLIVEGFN LVKKHQKPNP QLGVAGGVIE
KEAPMQASNV AIFNQATGKA DRVGFRFEDG KKVRFFKSNS ELVK
|
|---|
| |