| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0143 |
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| Symbol | rpsL |
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| ID | 4277808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 165847 |
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| End bp | 166221 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638132893 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_748844 |
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| Protein GI | 114561331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000877595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG TTAACCAGTT GGTACGTAAG CCACGCACGC CAAAAGTCGA AAAGACTAAT
GTGCCTGCGT TGAACGCGTG CCCACAAAAA CGTGGTGTTT GTACTCGTGT GTACACTACA
ACACCTAAAA AACCTAACTC TGCACTACGT AAAGTAGCTC GTGTGCGTCT AACTAACGGT
TTCGAAGTAA CTTCGTATAT CGGTGGTGAA GGCCATAACT TGCAAGAGCA CAGTGTAATT
CTAATCCGTG GTGGTCGTGT TAAAGACTTA CCTGGTGTGC GTTACCACAC TGTTCGTGGC
GCATTAGACT GTGCTGGCGT GACTTCACGT CGCCAAGGCC GTTCTAAGTA CGGTGCTAAG
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATVNQLVRK PRTPKVEKTN VPALNACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCAGVTSR RQGRSKYGAK
RPKS
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