| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0132 |
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| Symbol | |
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| ID | 4277114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 149597 |
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| End bp | 150559 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638132878 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_748833 |
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| Protein GI | 114561320 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000234608 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAGC ATTGGTCGCG TAAACGGCAA ATATTAGCAT GTTTGCATCA TGAGCGTTTT
GTTTCTGGTG AGGTAATTGC GCAATCCTTG TCGCTTACTC GTGCAGCAAT TAATCAGCAT
ATAGATGCAT TAAAAGATTA TGGTATCGAA ATTTATAGTG TGAAAGGAAG AGGCTATAAA
TTAGCAAATC CAGTGTCGTT GGTAAATGAG TCTCATCTTG TTAATGGAAT TGATGGCCGT
TGTTTTTATT TTGATGAAAC GACCAGCACT AATGCTTTTA TGCTTGGACA TGCCTCAGAA
TTAAAATCGG GTGATATTTG CATTGCTGAA TATCAATCCG CTGGTCGAGG TCGAAGAGGG
CGTCAATGGT TGTCTCCTTA TGCTCATCAT ATTTATGCTT CCATGTTTTG GCGTTTAAAT
AATGATATTA GTCATGCCAG TGGTTTAAGT TTAGTTGTAG GTTGTTCTAT TGTTAAATCT
TTAGCTGACT TTGGAGTTGA GGGGTTGGGA CTGAAATGGC CAAATGATAT CTACCTTGAT
CATAAAAAAT TGGCTGGGAT TTTAGTTGAG GTCAGCAATT CGTCAGCTCA GAAAACAGAA
TTAGTCATTG GTTTTGGGAT TAATATGAGT ATGTCTGTAG AGCAGGGGGA GCTAATAGAC
CAGCCATGGA ACGATCTATC TGGTTTGGTG AATATGCCTG ATAAAACGGA GCTATTAATT
AAACTACACA AAACCCTTAA GGCTGATTTA CAGCTGTTTG AGCAGAAAGG GTTGGAGGCT
TTCCTTGATC GTTGGAATAA ATTTGATTTA TTTATTGGCC GTGAAGTATC ACTACTAATG
GCACCTAATT CTGTTAACGG TATCTGTCGA GGTATTGACG AGCAAGGGGC TTTGTTACTT
GAAAACGAGC AAGGGGTTAC ACGTTATCTT GGCGGTGAAA TTAGCCTGCG AGCAGTAATG
TAG
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| Protein sequence | MNEHWSRKRQ ILACLHHERF VSGEVIAQSL SLTRAAINQH IDALKDYGIE IYSVKGRGYK
LANPVSLVNE SHLVNGIDGR CFYFDETTST NAFMLGHASE LKSGDICIAE YQSAGRGRRG
RQWLSPYAHH IYASMFWRLN NDISHASGLS LVVGCSIVKS LADFGVEGLG LKWPNDIYLD
HKKLAGILVE VSNSSAQKTE LVIGFGINMS MSVEQGELID QPWNDLSGLV NMPDKTELLI
KLHKTLKADL QLFEQKGLEA FLDRWNKFDL FIGREVSLLM APNSVNGICR GIDEQGALLL
ENEQGVTRYL GGEISLRAVM
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