Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0124 |
Symbol | |
ID | 4277106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 137823 |
End bp | 138440 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638132865 |
Product | DNA-binding transcriptional repressor FabR |
Protein accession | YP_748825 |
Protein GI | 114561312 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000427607 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGTTA GAGCACAACA AAAGGAAAAA ACACGTCGTG CATTAGTGGA TGCTGCATTT AATCAACTCA GTGCTGAACG AAGTTTTTCC AGCCTAAGCT TACGTGAAGT TGCTCGCGAA GCTGGTATTG CGCCCACATC ATTCTATCGC CATTTTAAAG ATATGAACGA ACTTGGCTTG ACCATGGTCG ATGAAGGCGG ATTAACATTA CGTCAAATGA TGCGTAAAGG TCGTCAACGT GCGGAAGCTG GTGGTAGTGT GATCCGTATT TCTGTCGACA CTTTTATGGA AGTATTAGAG TCAAATCCGA ACGTATTTCG AATACTATTA CACGAACGCT CCGGTACCTC AGCAGCATTT AGAGCTGCAG TTGAGCGTGA AATTGAACAT TTTATTTCTG AACTTGCCCA TTACACCGAA GCACAGGCAA ACCGAACACC TGTATTAGCG CGTGCTCAAG CTGAAGCGTT GGTTATTTTA GTGTTTAATG CGGGAGCATC AGCTTTGGAC TCTAAACGTA GTGAGCGTAA ATCATTGGCC GATCAGCTCG TACTGCAGTT GCGTATGGTC GCAACGGGAG CTGAAGCGCT ACAGCACAAA ATAGACAATC GCGCCTAA
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Protein sequence | MGVRAQQKEK TRRALVDAAF NQLSAERSFS SLSLREVARE AGIAPTSFYR HFKDMNELGL TMVDEGGLTL RQMMRKGRQR AEAGGSVIRI SVDTFMEVLE SNPNVFRILL HERSGTSAAF RAAVEREIEH FISELAHYTE AQANRTPVLA RAQAEALVIL VFNAGASALD SKRSERKSLA DQLVLQLRMV ATGAEALQHK IDNRA
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