Gene Sfri_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0124 
Symbol 
ID4277106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp137823 
End bp138440 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content45% 
IMG OID638132865 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_748825 
Protein GI114561312 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000427607 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTTA GAGCACAACA AAAGGAAAAA ACACGTCGTG CATTAGTGGA TGCTGCATTT 
AATCAACTCA GTGCTGAACG AAGTTTTTCC AGCCTAAGCT TACGTGAAGT TGCTCGCGAA
GCTGGTATTG CGCCCACATC ATTCTATCGC CATTTTAAAG ATATGAACGA ACTTGGCTTG
ACCATGGTCG ATGAAGGCGG ATTAACATTA CGTCAAATGA TGCGTAAAGG TCGTCAACGT
GCGGAAGCTG GTGGTAGTGT GATCCGTATT TCTGTCGACA CTTTTATGGA AGTATTAGAG
TCAAATCCGA ACGTATTTCG AATACTATTA CACGAACGCT CCGGTACCTC AGCAGCATTT
AGAGCTGCAG TTGAGCGTGA AATTGAACAT TTTATTTCTG AACTTGCCCA TTACACCGAA
GCACAGGCAA ACCGAACACC TGTATTAGCG CGTGCTCAAG CTGAAGCGTT GGTTATTTTA
GTGTTTAATG CGGGAGCATC AGCTTTGGAC TCTAAACGTA GTGAGCGTAA ATCATTGGCC
GATCAGCTCG TACTGCAGTT GCGTATGGTC GCAACGGGAG CTGAAGCGCT ACAGCACAAA
ATAGACAATC GCGCCTAA
 
Protein sequence
MGVRAQQKEK TRRALVDAAF NQLSAERSFS SLSLREVARE AGIAPTSFYR HFKDMNELGL 
TMVDEGGLTL RQMMRKGRQR AEAGGSVIRI SVDTFMEVLE SNPNVFRILL HERSGTSAAF
RAAVEREIEH FISELAHYTE AQANRTPVLA RAQAEALVIL VFNAGASALD SKRSERKSLA
DQLVLQLRMV ATGAEALQHK IDNRA