Gene Sfri_0108 details

Gene Information

• Locus tag: Sfri_0108
• ID: 4277178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 123379
• End bp: 123813
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638132849
• Product: general secretion pathway protein G
• Protein accession: YP_748809
• Protein GI: 114561296
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACATA ATAATAAACA ACGTGGTTTC ACCTTACTCG AAGTAATGGT GGTGATTGTT 
ATTTTAGGTA TTTTAGCGTC AATGGTTGTG CCCAATCTGA TGGGTAACAA AGATAAAGCC 
GATCAACAAA AAGCGGTATC AGATATTGTG GCATTAGAAA ATGCATTGGA TATGTATAAG 
TTAGATAACA GTATTTATCC AACCACAGAA CAAGGTCTCG ATGCGTTGGT GCAAAAACCT 
ACCTCGTCAC CAGAGCCGCG TAATTTCCGT GAAGGTGGGT ATGTTAAACG TTTACCACAA 
GATCCATGGC GCAGTGACTA TTTATTATTA AGCCCTGGTG AAAATGGCAA AATTGACATC 
TTCAGCGCAG GACCAGATGG ACAACCAGGT TCTGAAGACG ATATCGGAAG CTGGAATTTA 
CAAGATTTCC AATAA 

 

Protein sequence

MQHNNKQRGF TLLEVMVVIV ILGILASMVV PNLMGNKDKA DQQKAVSDIV ALENALDMYK 
LDNSIYPTTE QGLDALVQKP TSSPEPRNFR EGGYVKRLPQ DPWRSDYLLL SPGENGKIDI 
FSAGPDGQPG SEDDIGSWNL QDFQ