Gene Sfri_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0098 
Symbol 
ID4278270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp110654 
End bp110977 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content39% 
IMG OID638132839 
Productexcinuclease ABC subunit C 
Protein accessionYP_748799 
Protein GI114561286 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.807182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAC TTAAGGTTTT ATATTTTATG TCGAAAAATA ATGCCAAGAC GGGTTGGTAC 
TTGTACATTA TTCGCTGTGC AAACTCACAT TTATACACGG GTATCACCAC CGATATTGCT
CGTCGTTTTG CCGAGCATCA AGCCAGTGGT CCTAAAGCGG CTAAATATTT AAAAGGTAAA
GGCCCGTTAA CCTTAGTTTA TCAAGAATCA TTAGCTGATC GAAGTGAAGC GTCAAAACGC
GAGATTACTG TTAAAAAATA TACTAGGCAG CAAAAATTAT TGTTGATTGA ACAGCATGCG
TTAATCCACC CAACGGAACG ATAA
 
Protein sequence
MITLKVLYFM SKNNAKTGWY LYIIRCANSH LYTGITTDIA RRFAEHQASG PKAAKYLKGK 
GPLTLVYQES LADRSEASKR EITVKKYTRQ QKLLLIEQHA LIHPTER