Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0098 |
Symbol | |
ID | 4278270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 110654 |
End bp | 110977 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638132839 |
Product | excinuclease ABC subunit C |
Protein accession | YP_748799 |
Protein GI | 114561286 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.807182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACAC TTAAGGTTTT ATATTTTATG TCGAAAAATA ATGCCAAGAC GGGTTGGTAC TTGTACATTA TTCGCTGTGC AAACTCACAT TTATACACGG GTATCACCAC CGATATTGCT CGTCGTTTTG CCGAGCATCA AGCCAGTGGT CCTAAAGCGG CTAAATATTT AAAAGGTAAA GGCCCGTTAA CCTTAGTTTA TCAAGAATCA TTAGCTGATC GAAGTGAAGC GTCAAAACGC GAGATTACTG TTAAAAAATA TACTAGGCAG CAAAAATTAT TGTTGATTGA ACAGCATGCG TTAATCCACC CAACGGAACG ATAA
|
Protein sequence | MITLKVLYFM SKNNAKTGWY LYIIRCANSH LYTGITTDIA RRFAEHQASG PKAAKYLKGK GPLTLVYQES LADRSEASKR EITVKKYTRQ QKLLLIEQHA LIHPTER
|
| |