Gene Sfri_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0096 
Symbol 
ID4278268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp108516 
End bp109286 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content43% 
IMG OID638132837 
Productmolybdopterin biosynthesis protein MoeB 
Protein accessionYP_748797 
Protein GI114561284 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID[TIGR02355] molybdopterin synthase sulfurylase MoeB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAC TTGATCAAGA GATACTCACT GATAATGAAA TGCTGCGCTA TAGCCGGCAG 
ATCTCTATTA AGGCTATCGA TATCGATGGC CAAGAAAAGC TCAAGCTTGC CAAAGTACTA
ATTATTGGTG CAGGCGGACT TGGCTGTGCA GCAAGTCAAT ACCTTGCCGT GGCTGGGGTT
GGTGAAATCA CCTTAGTTGA TTTTGATACC GTAGAGCTGT CTAATTTGCA GCGCCAAGTA
TTGCACTATG ACGCCAATAT TGGCCAAGCA AAAGTTGAAT CGGCTAAGCA ATCGCTGATG
CTGCTAAATC CATTAATTAA CATCAATACC ATTAATGCGT TATTAGATGA TGATGAGATT
AACGTGTTGG TGAGTCAACA TAGCTTAATT CTGGATTGCA CAGACAATAT GTTAGTGCGT
GAACAGCTTA ATAAAAGCTG TTTTGAGCAC CAAGTGCCTT TAGTTTCAGC CGCGGCTATT
AGAATGGAAG GCACTGTTAC AGTATTTGAC TACCAACAAG ACAGCCCTTG CTATCAATGC
TTTAGTGCTT TATTTGGTGA ACAACAGCTA ACTTGTGTTG AAGCGGGCAT TCTTGCGCCT
GTGGTCGGCA TGATTGGCTG CATTCAAGCA ACAGAAGCAA TAAAAGTCAT CACGGCTATC
GGCGAGCCAT TAACCGGAAA ATTGTTGATG ATTGATGCGA TGACCATGGA GTTTAGGCAA
ATGCGTTTAC CTAAACAACC ACATTGTAAA GTATGCGGTG TTAATCCGTA G
 
Protein sequence
MDSLDQEILT DNEMLRYSRQ ISIKAIDIDG QEKLKLAKVL IIGAGGLGCA ASQYLAVAGV 
GEITLVDFDT VELSNLQRQV LHYDANIGQA KVESAKQSLM LLNPLININT INALLDDDEI
NVLVSQHSLI LDCTDNMLVR EQLNKSCFEH QVPLVSAAAI RMEGTVTVFD YQQDSPCYQC
FSALFGEQQL TCVEAGILAP VVGMIGCIQA TEAIKVITAI GEPLTGKLLM IDAMTMEFRQ
MRLPKQPHCK VCGVNP