Gene Sfri_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0079 
Symbol 
ID4278163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp93339 
End bp93698 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content38% 
IMG OID638132820 
Producthypothetical protein 
Protein accessionYP_748780 
Protein GI114561267 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC CGATAGACGA CGTTAGCAAG CAAGCCAAAG ATACGGGGTT ATTGATCCAT 
GCCGCCAGTT TTACCGGTTA CGTATTTCCG CTAGGAAGTG TTTTAGGCCC TTTAATTGTC
TGGTTAATGA AGCGTGATGA ATTTGAGTTT GCCAATCAAT GCGGAAAGAA CTGTCTTAAT
TTTAAATTGA GCTTAATGAT ATATGCCATG GTATCTGCAA TATTAATTTT GATTGGTGTG
GGAGTAATAC TATTAGCCGC TCTAGCATTG CTTGATATTA TTTGTACTAT TATCGCTATT
GTTAAAGCTA ACGATGGCAT AGCTTACCAA TACCCGCTTA CTATCCGGTT TATTAAGTAA
 
Protein sequence
MTEPIDDVSK QAKDTGLLIH AASFTGYVFP LGSVLGPLIV WLMKRDEFEF ANQCGKNCLN 
FKLSLMIYAM VSAILILIGV GVILLAALAL LDIICTIIAI VKANDGIAYQ YPLTIRFIK