Gene Sfri_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0074 
Symbol 
ID4278158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp88420 
End bp89289 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content41% 
IMG OID638132815 
Producttranscriptional regulator, AraC family protein 
Protein accessionYP_748775 
Protein GI114561262 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA TAGCAACATT AATGGCACAG CTTGCCCCAA AAGAAGGGGT CAATGATACT 
CACTTATCTG GCGTGCATGT GTTTCGTAGC TCACAATATG GTGCGCGCGG GCCAATGTGC
TATTCACAAG GCGTGCTTAT TGTTGGCCAA GGTAAAAAGC GGGTCTATTT AGATAATCAA
ACCTTTGAAT ACGACCGTCA GCACTCATTA GTGATGACCG TGCCATTGCC AGTAGAATGT
GAAACCTTTG CCAGCATTGA AGAACCTGTG CTGGTGTTGA TGGTTGATAT TGATTTAGTA
CAACTCAATT ACATTATCCG TTTAATGGAT GAGCATCATC AAATCCCTAA AGATTTAAAC
GAATCGCGCC AGAGTGGTTT TTTTGTTGCT GATAACACTG AAGATATGGA TTGCTGTGTT
ATTCGGTTAT TACAGGCGTT GCAGTCGCCG TTAGAAGCAA AAGTAATGGG TGAAGCGTTA
GTGCTTGAAT TATTATATCG CCTATTGGAT TCACCTGATG CTGCACCACT CTATGCGTTG
TCGTTAAGTC ATACCCGTTT ATCGAGGGTA GAAAAAGCGC TTAACTACAT TCATAAGCAT
TATGGTGAGT CGGTTGAAGT TGACACATTA GCAAGCTTGG TGAATATGAG TCCATCGGCA
TTCCATCGTA GCTTTAAAGA AGTTACTGCT TCATCACCAA TACAATATTT AAAAAAGATT
CGCCTCAATA AAGCCAAAGC GTTATTACAA CTGCAAAATC TAAAAGTAAA AGAGGTATCA
ACTCAGGTGG GTTATGAAAG TACGGCTCAA TTTAGCCGTG AGTTTAAACG CTACTTTGAT
CAAAGCCCTG GCGAGTGCGC TAGATTATAA
 
Protein sequence
MNEIATLMAQ LAPKEGVNDT HLSGVHVFRS SQYGARGPMC YSQGVLIVGQ GKKRVYLDNQ 
TFEYDRQHSL VMTVPLPVEC ETFASIEEPV LVLMVDIDLV QLNYIIRLMD EHHQIPKDLN
ESRQSGFFVA DNTEDMDCCV IRLLQALQSP LEAKVMGEAL VLELLYRLLD SPDAAPLYAL
SLSHTRLSRV EKALNYIHKH YGESVEVDTL ASLVNMSPSA FHRSFKEVTA SSPIQYLKKI
RLNKAKALLQ LQNLKVKEVS TQVGYESTAQ FSREFKRYFD QSPGECARL