Gene Sfri_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0072 
Symbol 
ID4278156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp86474 
End bp86806 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content39% 
IMG OID638132813 
Productsmall multidrug resistance protein 
Protein accessionYP_748773 
Protein GI114561260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.271794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTT GGATATTTTT AAGTGTGGCA ATTTTAACTG AGGTTGTAGC CACTTCAGCG 
CTTAAAGCCA GTGATGGATT TTCAAAATTA ACGCCTTCAA TTGTAGTTAT TGTGGGCTAC
GTGTTGTCGT TTTATTTTTT ATCCTTAGCG CTAAAAGGTA TTCCTGTTGG TATTGCTTAT
GCAACTTGGG CTGGATTGGG CATTGTGTTA ATTACAGCTA TCGCTTGGGT GATGTATGGG
CAAAAACTCG ATTTAGGTGC GCTGGTGGGT ATGACGTTTA TTTTAGTCGG TGTCGTTGTG
ATGAATTTAT TCTCAAACGT TACGCCGCAT TAA
 
Protein sequence
MKSWIFLSVA ILTEVVATSA LKASDGFSKL TPSIVVIVGY VLSFYFLSLA LKGIPVGIAY 
ATWAGLGIVL ITAIAWVMYG QKLDLGALVG MTFILVGVVV MNLFSNVTPH