Gene Sfri_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0066 
Symbol 
ID4277661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp80276 
End bp80662 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content39% 
IMG OID638132807 
Producthypothetical protein 
Protein accessionYP_748767 
Protein GI114561254 
COG category[S] Function unknown 
COG ID[COG5395] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACA GTCACTTATC TTATCTGCAT TTAGTCACAG TCGTCCCAGC ATTTTTCATT 
GGCAGTTATT TGCTTGTTGT TCGAAAAGGT ACAGCTAAAC ACAAAGCACT AGGCAAAATT
TATATGGTGC TGATGTTGTT TACTGCCATT GTGTCATTGT TTATGCCTGC TCAACTTGGG
GCAAGTTTTT TGAATCACTT TGGCTATATT CATTTGTTAA GTCTTCTAAC GCTGTACGCG
GTTCCTGCTG GCTATTTTTA TATTAAAAAA GGCAATGTGC GAGGACACAA ACGAAGCATG
ATTATTTTGT ATTGTGGTGG CCTCATTGTC GCGGGTACCT TTGCTTTTAT GCCGGGTAGA
TTATTGCATG ATTGGATTTT TAGCTAA
 
Protein sequence
MDYSHLSYLH LVTVVPAFFI GSYLLVVRKG TAKHKALGKI YMVLMLFTAI VSLFMPAQLG 
ASFLNHFGYI HLLSLLTLYA VPAGYFYIKK GNVRGHKRSM IILYCGGLIV AGTFAFMPGR
LLHDWIFS