Gene Sfri_0062 details

Gene Information

• Locus tag: Sfri_0062
• ID: 4277657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 76457
• End bp: 77254
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638132803
• Product: hypothetical protein
• Protein accession: YP_748763
• Protein GI: 114561250

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATATTT CAGAATCACA TACAAAAGAG CTTTTAGTTG CCAAATCGCT ATTAGAAAAT 
CCTGGTCTGG CGGTAAAAAT AACCAATTTA ATCGGTACTC CTATTGAAAA AGGGTTAGCG 
TTACTACCTG ATAACTGGAA TAAAAATATC GCTAAAGTGA CAGAGAAGTC GTTAATTAAA 
GCATCTGAAG CGGCAATATT TACCATGAAA GATATTCCCG GAGAAGAATC GTCCAATCTT 
TGGCATAAAT TAGGCGTTGC TGCGAGTGGT GGTGTGGGTG GTTTCTTTGG ATTAGCTGCG 
ATAGCTGTTG AGCTTCCTAT TTCAACATCA ATCATGCTGC GATCTATCGC TGATATTGCT 
CGTAGTGAAG GTGAATTGAT TACCACTCTG GAAACAAAAA TGGCTTGTTT GGAGGTGTTC 
GCGCTGGGGG GCGAAAGTGA TTTAGATGAT GGTAGTGAAT CCGGATATTT TGCAGTAAGA 
GCCGCCCTAG CAAAATCGGT ATCAGAAGCT GCTGAGTTTA TGGTTAAAAA AGGTATTACC 
GATGAAGCAG CGCCTATGTT AGTCAAACTT ATTACTAAAA TAGCTGAAAA GTTTGGGGTT 
CAAGTTACTC AAAAAGCAGC AGCCCAAGCG GTACCTGCTA TCGGTGCCGC AGGTGGTGCC 
ATAATCAATA CATTGTTTAT TGATCACTTT CAAGATATGG CGAGAGGTCA TTTTATTGTG 
CGAAAATTAG AGCGTATATA TGGGTATGAG ACAATAAAAA GCGCATATCA TTCATTACCT 
AGAAAGGGCA GTAAATAA 

 

Protein sequence

MNISESHTKE LLVAKSLLEN PGLAVKITNL IGTPIEKGLA LLPDNWNKNI AKVTEKSLIK 
ASEAAIFTMK DIPGEESSNL WHKLGVAASG GVGGFFGLAA IAVELPISTS IMLRSIADIA 
RSEGELITTL ETKMACLEVF ALGGESDLDD GSESGYFAVR AALAKSVSEA AEFMVKKGIT 
DEAAPMLVKL ITKIAEKFGV QVTQKAAAQA VPAIGAAGGA IINTLFIDHF QDMARGHFIV 
RKLERIYGYE TIKSAYHSLP RKGSK