| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0047 |
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| Symbol | |
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| ID | 4278254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 59837 |
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| End bp | 62674 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132788 |
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| Product | peptidase M6, immune inhibitor A |
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| Protein accession | YP_748748 |
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| Protein GI | 114561235 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGT TGACTAAATA TCAAGGGTTA GCCGTTTTAT CCTTATTGCT TGCATGTAGC
GGTATGGCTG CTGTTGCTGC TCCACAAACA GGCACTCCTG CTGATGCGGG GCTAATTAAT
GAACAACAAG TGTTGTATTG GTTAATTAAA CGTGGCGAAG TGAGTGTTGA TGCCAGCGAA
GCTGAAAAAC AAGCTGCAGT AGATGCTTTT GTAAGCCGTG GCCGAAATAC CACTTTTAAA
CCTGCTGCCA TAGAAGTGAA AGCGGAACAA TTACGCATTA AACGCTCAGC GCAAAAAAAT
ACTAAAAATG TTCAATATGC CGCAGCAAAT AACAAAGTCT TAGCCGATCA AGATATTACT
AAAACGGTAA AGGTGTTAGC TGTATTGGTA GACTTTCCTG ATTTACCTCA TGATGCTAAC
CAGCTTAACG TAGGTGATAC GGACATGTAT TACAGCAGCT ACCCAACATC ACATTATCAG
CAACTGCTAT TTTCAGAGAC TGGTTTTACA GGCCCAAGTA ATCAAACGCT ACAATCGGCA
CATCAGTATT TTCAGGCGGT GTCCGGCAAT AGTTTTTATT TTACCGGTCA AGTACAAGAC
TGGGTCACCG CAGACAATAA TGCCGCTTAT TATGGTGGCA ACGACTCCGA TGACAACGAT
AAAGCCGTCC CAGAGCTAGT AAAAGAAGCT GTCACCAAAG CAGTAAGCGG AATGAGTGAT
ACTGAACTTG AAAGCTATGA TATTGAAGAC CCTTTCGATA TCGATGGCGA CGGTAATTAT
GATGAAGCTG ACGGTATTAT CGATCACGTG ATGCTGTTTC ATTCAAGCAT CGGTGAAGAA
GCTGGTGGTG GAGTATTGGG TGAGGATGCA ATTTGGTCGC ATCGTTTTTA TGTCGATTCA
AATACCAATG GTTATGTTAT TCCTGGCCGG GCCCTTAAGA TATTCGGTTA CACCGTGCAG
CCAATCGATG CTGCGGCAGG AGTATGCACC CACGAGTTTG GTCATGATTT AGGCTTACCC
GATGAGTACG ACACTACTAA TAGTGGTGAT GGTTCACCTG TAGGTTCTTG GTCATTGATG
TCTGGCGGTA GCTGGACCGG TAGTATTGCT GGTGCTCAAC CAAGTGGGTT TAGCCCATAT
GCAAAATCTT TCTTACAGCA AAAATACAAA GGTAAGTGGG TTAATGAGCA GCATATATCT
CTTGCCGATT TAACCAGTAG CGGTACCGCT GTGCAACTTA ACCATGCCGT CAATACAGAT
GCCGTAAACC AGCTATCTAT AGCGCTACCA GCTGAGGCTG TTGCTTTTAA AGCACCATTA
ACGGGTCAAT ATCAGTATTA TTCAGGTCAG GGTAATATGA TCAATAATGC CATGTCTTTT
GATGTGACCT TACCATTAGA TACGCCATTA GCATTATCAT TTCAAGCCCA TTGGGATATA
GAAGACGATT ATGATTATGT GCAGGTGTTG GTTGATAGCG TTGCAATAGA AGGTAGCTAC
ACAAATAGTA CAAATTCAAT TTACCCTACG GTAAAACACT CTATTAGCGG TAAATCGAGC
GACATTAGTA CCGCGTATGG AAGCGATTCT TGGGTGGATT TTAATTTTGA TTTGAGTGCA
TATGCCGGTC GTGATGTGCA AATCAGTGTG GTCTATAAAA CCGATGAAGC AGTTGGTGAT
TATGGTATGG CGATTGATGA TATTCAATTA ACTAACCAAG GCACGGTATT TTATATCGAT
GGAGCTGAAT CAAGCGGCGT TGCAACGCTA TCTGGTTTTA GCCGTATTGA AGATAGTCTT
GCTGGTAAAG CGAGACGTTA CATTGTGCAA TTACGCAGCC ACCAAGGTGT AGATGCTGGG
CTGGTTTATG ACAAATACGA ATCCGGTGTG CTGTTATGGT TAGAAAACTT TAATCAAACC
GATAACAATG TCTCTGATCA TCCAGGGGAA GGGTTAATTG GCGTGGTTGA TGCAGACCAA
AATTTGATTG GCAGTCAATC TACTGATGTG CAAATTCGCG ATGCAGCATT TAGCTTATTT
GCCCAAAGTA CATACAGTGG TGATAACCAC TTAGCTGCCG AGCCACTATT TGATGACAAC
CGTGATTACA GCGCGCCGCT AAAACCACAG GCCGGGCTGA TATTGCCTGA GTTAGGCCTA
ACCATGCAAG TCACAGAGCA AGCAACAGAC AGCAGTACTG CAACTGTTGA ATTTGCTTTG
TCTGACAGCA GCGTGCTACC ACCGGTTACA CTTGTCGCCG ACATTAATGC ACAAGCAACC
GGTGCAGATG TTAGTTTTAA TGTGGTCGTG AGTGGCGGCG CTGATTACAC TTATACATGG
TCGTTTGGCG TGAATAATGC CACCAGTACC GATACTGCCC CTAGCTATAC TTATTCCACA
TCGGGTGATT ATAACGTCAG TGTTATTGTT ACCGATGGCG CGGGTAATAC CGTGACAGCA
ACCGAAGTAG TCCGAGTGGT TATTCTGCCA ATAGCAGCTT TTACTTTATT ACCGACTAAC
TTAACTGTGG CTCTGACAAA CACCTCCAGC CAAGGTTTTG GTAATTTGAC TTATCAATGG
GACTTTGGCG ATAGCAGTAC TAGTACGGCG CAAAGTCCAA GTCATACCTA TACAGCCGCT
GGCACTTATA CCATTACCTT AAAGACCACC GATTCTCAGG GTAATGAGTC GACAGCAAAT
CAAGCAATCA CTGTATCGAC GCCAATAGTG GCTGTGACTA CACCAACCAC AACAGACAGT
GGTAGTAGCG GCGGTAGTTT GGGATGGTTA AGTGTATTGA TGCTAGGCCT ATTAGGTTAT
CACCGCAAAC GGGTTTAG
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| Protein sequence | MSKLTKYQGL AVLSLLLACS GMAAVAAPQT GTPADAGLIN EQQVLYWLIK RGEVSVDASE
AEKQAAVDAF VSRGRNTTFK PAAIEVKAEQ LRIKRSAQKN TKNVQYAAAN NKVLADQDIT
KTVKVLAVLV DFPDLPHDAN QLNVGDTDMY YSSYPTSHYQ QLLFSETGFT GPSNQTLQSA
HQYFQAVSGN SFYFTGQVQD WVTADNNAAY YGGNDSDDND KAVPELVKEA VTKAVSGMSD
TELESYDIED PFDIDGDGNY DEADGIIDHV MLFHSSIGEE AGGGVLGEDA IWSHRFYVDS
NTNGYVIPGR ALKIFGYTVQ PIDAAAGVCT HEFGHDLGLP DEYDTTNSGD GSPVGSWSLM
SGGSWTGSIA GAQPSGFSPY AKSFLQQKYK GKWVNEQHIS LADLTSSGTA VQLNHAVNTD
AVNQLSIALP AEAVAFKAPL TGQYQYYSGQ GNMINNAMSF DVTLPLDTPL ALSFQAHWDI
EDDYDYVQVL VDSVAIEGSY TNSTNSIYPT VKHSISGKSS DISTAYGSDS WVDFNFDLSA
YAGRDVQISV VYKTDEAVGD YGMAIDDIQL TNQGTVFYID GAESSGVATL SGFSRIEDSL
AGKARRYIVQ LRSHQGVDAG LVYDKYESGV LLWLENFNQT DNNVSDHPGE GLIGVVDADQ
NLIGSQSTDV QIRDAAFSLF AQSTYSGDNH LAAEPLFDDN RDYSAPLKPQ AGLILPELGL
TMQVTEQATD SSTATVEFAL SDSSVLPPVT LVADINAQAT GADVSFNVVV SGGADYTYTW
SFGVNNATST DTAPSYTYST SGDYNVSVIV TDGAGNTVTA TEVVRVVILP IAAFTLLPTN
LTVALTNTSS QGFGNLTYQW DFGDSSTSTA QSPSHTYTAA GTYTITLKTT DSQGNESTAN
QAITVSTPIV AVTTPTTTDS GSSGGSLGWL SVLMLGLLGY HRKRV
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