Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0043 |
Symbol | |
ID | 4278250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 56007 |
End bp | 56756 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638132784 |
Product | hypothetical protein |
Protein accession | YP_748744 |
Protein GI | 114561231 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTATTT TATTTATTGC CGTTGAGGCG CATCCGGATT ACCCCTTAAT TGTCTGTGCT AATCGCGATG AATTTCATCA CAGAGCAACC GAACCTGCCT ACCGTTGGGC AACAACACCA ATCATTATCG CTGGGCAAGA TAAACAAGCC GGTGGTACTT GGTTAGGAAT TAATGAACAG GGTCAATTTG CTGGGCTAAC TAATATTCGA GCAATCGAAC AGCAAGATGG CGTACGCAGT CGTGGAGAGT TAGTCGTTGA CGCGCTAACC AAACAACACA TCAATAGCCA ATGGCTAACT GAACACTCGA TTAACTACAA TCCGTTTAAT TTAGTCTTCG AACAGCACAA TCAACTCCAT TGCTTTAACA GTAAAACCTT AACGACTACT TTGCTTAAGC CTGGTTTTCA TGCTGTGAGT AACGGTGCGC TGGATGATAT ATGGCCTAAA ATGGCTAAAG GTCAGCAACA GCTACAAAGC TATATCAAAC AAATGCAATC ACCTTGCATA GACCAATTAC TCAATATCAT GCGCGATACT TCTCAACCCA AAGATCAAGA TTTACCCCAA ACAGGCATCA GTCTTGAGTG GGAGCGACGT CTATCATCTA TTTTTATCGA ACATGAAGAA TACGGCACTC GTTCAACGAG TGTTGTGTTG AAACACCGCA GCGGTAAAGT ACAACTTACT GAAGTGAGAT ACGATGGTAA GGCACGCAAT TTAGGCTCTC AACGTTTTAA CCTTGGCTAG
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Protein sequence | MCILFIAVEA HPDYPLIVCA NRDEFHHRAT EPAYRWATTP IIIAGQDKQA GGTWLGINEQ GQFAGLTNIR AIEQQDGVRS RGELVVDALT KQHINSQWLT EHSINYNPFN LVFEQHNQLH CFNSKTLTTT LLKPGFHAVS NGALDDIWPK MAKGQQQLQS YIKQMQSPCI DQLLNIMRDT SQPKDQDLPQ TGISLEWERR LSSIFIEHEE YGTRSTSVVL KHRSGKVQLT EVRYDGKARN LGSQRFNLG
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