Gene Sfri_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0043 
Symbol 
ID4278250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp56007 
End bp56756 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content43% 
IMG OID638132784 
Producthypothetical protein 
Protein accessionYP_748744 
Protein GI114561231 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTATTT TATTTATTGC CGTTGAGGCG CATCCGGATT ACCCCTTAAT TGTCTGTGCT 
AATCGCGATG AATTTCATCA CAGAGCAACC GAACCTGCCT ACCGTTGGGC AACAACACCA
ATCATTATCG CTGGGCAAGA TAAACAAGCC GGTGGTACTT GGTTAGGAAT TAATGAACAG
GGTCAATTTG CTGGGCTAAC TAATATTCGA GCAATCGAAC AGCAAGATGG CGTACGCAGT
CGTGGAGAGT TAGTCGTTGA CGCGCTAACC AAACAACACA TCAATAGCCA ATGGCTAACT
GAACACTCGA TTAACTACAA TCCGTTTAAT TTAGTCTTCG AACAGCACAA TCAACTCCAT
TGCTTTAACA GTAAAACCTT AACGACTACT TTGCTTAAGC CTGGTTTTCA TGCTGTGAGT
AACGGTGCGC TGGATGATAT ATGGCCTAAA ATGGCTAAAG GTCAGCAACA GCTACAAAGC
TATATCAAAC AAATGCAATC ACCTTGCATA GACCAATTAC TCAATATCAT GCGCGATACT
TCTCAACCCA AAGATCAAGA TTTACCCCAA ACAGGCATCA GTCTTGAGTG GGAGCGACGT
CTATCATCTA TTTTTATCGA ACATGAAGAA TACGGCACTC GTTCAACGAG TGTTGTGTTG
AAACACCGCA GCGGTAAAGT ACAACTTACT GAAGTGAGAT ACGATGGTAA GGCACGCAAT
TTAGGCTCTC AACGTTTTAA CCTTGGCTAG
 
Protein sequence
MCILFIAVEA HPDYPLIVCA NRDEFHHRAT EPAYRWATTP IIIAGQDKQA GGTWLGINEQ 
GQFAGLTNIR AIEQQDGVRS RGELVVDALT KQHINSQWLT EHSINYNPFN LVFEQHNQLH
CFNSKTLTTT LLKPGFHAVS NGALDDIWPK MAKGQQQLQS YIKQMQSPCI DQLLNIMRDT
SQPKDQDLPQ TGISLEWERR LSSIFIEHEE YGTRSTSVVL KHRSGKVQLT EVRYDGKARN
LGSQRFNLG