| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0030 |
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| Symbol | |
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| ID | 4278307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 34079 |
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| End bp | 35011 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638132768 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_748731 |
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| Protein GI | 114561218 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.210418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACA CCTCTTCCCA TGTGCCAGAC GCACAACAAG TAAAATCGTT TTTGTTGGGA
TTACAGCAAA ATATTTGTCA GCGTTTAGAG CTGCTCGACG GTAAAGCGAC GTTTAAAGCG
GATTCGTGGG AACGTGAAGA AGGTGGCGGT GGTACTAGTC GAGTATTAAC TCAGGGCCAA
GTGTTTGAGC AAGCCGGTGT TAACTTCTCA CATGTAATGG GCGCTGCTAT GCCCGCATCG
GCCACGGCAC ATCGTCCTGA ATTAGCTGGC CGTAGTTTTG AAGCTATGGG GGTGTCATTG
GTTATTCACC CTAATAATCC GTTTATTCCG ACCACGCATG CTAACGTGCG TTTTTTTATT
GCCCGTAAAG AAGGTGCTGA TCCGGTATGG TGGTTTGGTG GTGGATTTGA TTTAACGCCT
TATTATCCTT TCAAAGAAGA TGTCGTTAGC TGGCACCAAA CGGCTAAAGA TATTTGCGAT
CCATTTGGTG AAGACGTTTA TCCCAAGTAT AAAAAATGGT GTGATGAGTA CTTCTTCTTA
CCGCACCGCA ATGAAACCCG TGGTGTTGGT GGATTGTTTT TTGATGATCT TAACGAGCCT
GGCTTTGAGC GAAGCTTTGA GTTTATGCAA GCGGTAGGTA ACGGCTTTAT TGAAGCTTAT
GCGCCGATAG TTGAACGCAA CAAAGAGTTA GAATATGGCG ATGATGAACG TCAGTTCCAA
CTTTATCGCC GTGGTCGCTA TGTTGAGTTT AATTTGGTTT ATGATCGTGG CACTTTATTT
GGCCTGCAAA CAGGTGGCCG AACTGAATCT ATTTTAATGT CGATGCCACC ATTGGTTCGC
TGGGAATATG CATTCACCCC AGAAGAAGGG ACAGCAGAAG CTGAACTGTA TGACATCTAC
TTAAAACCAC AAGATTGGTT GGCTGCGGTC TAA
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| Protein sequence | MSNTSSHVPD AQQVKSFLLG LQQNICQRLE LLDGKATFKA DSWEREEGGG GTSRVLTQGQ
VFEQAGVNFS HVMGAAMPAS ATAHRPELAG RSFEAMGVSL VIHPNNPFIP TTHANVRFFI
ARKEGADPVW WFGGGFDLTP YYPFKEDVVS WHQTAKDICD PFGEDVYPKY KKWCDEYFFL
PHRNETRGVG GLFFDDLNEP GFERSFEFMQ AVGNGFIEAY APIVERNKEL EYGDDERQFQ
LYRRGRYVEF NLVYDRGTLF GLQTGGRTES ILMSMPPLVR WEYAFTPEEG TAEAELYDIY
LKPQDWLAAV
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