| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0026 |
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| Symbol | |
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| ID | 4278303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 31357 |
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| End bp | 32373 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132764 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_748727 |
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| Protein GI | 114561214 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTG AAGAGATTCG TCAACGTCTA GAGTTTGAAC CACAGGCCTT GCCTTTATCG
GCAAGCCTGT TGGCTAAATG CCATATCGAC TTTAATAAAG TAGAGCAAGC CCTAACTTGG
CTCGATTCGC AACCTAATCA CTACATTGTG ACCCTCTCTG ATCCTCTTTA CCCTCCATTA
CTTGCGCAAA TATCAGATCC ACCTCAGGTA TTATTTATTA AAGGCTCGAT AGAATCCCTT
TTATTACCGA GTATTGCGAT TGTTGGTAGC CGTAATGCCT CTCGAGGCGG CTTAGATATG
GCAGCAGATC TCGCTGGTCA TTTAGCTAAT CAAGGTTTTT CGATCACTAG TGGCATGGCG
ACGGGTATTG ATGGTGCAGC CCATAAAGCG ACTTTGGCGG TTGATGGAAC GACCATGGCG
GTGTTGGGTT GTGGGGTAGA GTGTATTTAT CCTAAGCGTC ATCAACACTT GTATCATGAC
ATTATTAATA CCGGTTGCGT AATCAGTGAA TACTGGCCAA GTATAGGGCC TTTTGCTGGT
AACTTTCCTC GGCGTAACCG GATTGTCAGT GGCTTAAGTC TGGGTACCGT GGTAGTAGAA
GCAAGCCGTA AAAGTGGTTC ATTAATCAGT GCTAGGCTGG CAATGGAGCA AAATCGTGAA
GTGTTTGCTG TACCAGGCTC CGTGTTAGGA GGATATAGCC AAGGTTGTCA TGATTTAATT
AAAAATGGTG CAAAACTTGT CGAGTCTGCT GCCGATATAA TAGAAGAATT AGGCTGTTTA
TCAGATTATC ACCTTGAACA ATTGCATCTA CGGCACCATA TACAGGATAA TGATGTTAGT
GATTTGCCAT TTCCTCCGCT GTTAGCTAGT GTAGGATATG AAACTACCGC GATAGATTCG
GTAGTTGAGG ATAGTGGGAA ACCGATAGAT CTGGTGTTAA TACAAATGCT TGAACTTGAA
TTACAAGGGT GGGTTGCAGC TGTGCCCGGT GGTTACGTCA GACTAAAGAG GAGTTAG
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| Protein sequence | MDVEEIRQRL EFEPQALPLS ASLLAKCHID FNKVEQALTW LDSQPNHYIV TLSDPLYPPL
LAQISDPPQV LFIKGSIESL LLPSIAIVGS RNASRGGLDM AADLAGHLAN QGFSITSGMA
TGIDGAAHKA TLAVDGTTMA VLGCGVECIY PKRHQHLYHD IINTGCVISE YWPSIGPFAG
NFPRRNRIVS GLSLGTVVVE ASRKSGSLIS ARLAMEQNRE VFAVPGSVLG GYSQGCHDLI
KNGAKLVESA ADIIEELGCL SDYHLEQLHL RHHIQDNDVS DLPFPPLLAS VGYETTAIDS
VVEDSGKPID LVLIQMLELE LQGWVAAVPG GYVRLKRS
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