| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0023 |
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| Symbol | |
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| ID | 4278300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 28563 |
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| End bp | 29519 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132761 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_748724 |
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| Protein GI | 114561211 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACCGT TAAAAATTAT CTTTGCCGGT ACTCCGGATT TCGCAGCTCG ACACTTACAA
GCACTCATCG ACTCTGAACA CGATGTGATT GCGACTTATA CTCAACCAGA TAGGCCTGCT
GGTCGAGGTA AGAAACTCAC CGCAAGCCCA GTAAAAGCTT TGGCTTTAGA GCATGCTATT
CCGGTATTTC AGCCTGCATC ATTACGTAAT GAAGAGGCAC AAGCGGAATT AGCTGCTCTT
AATGCAGATA TTATGATTGT TGTGGCTTAC GGGTTGATTC TGCCAAAGGT AGTGCTTGAT
ACCCCGCGTT TAGGTTGTAT CAATGTGCAC GGCTCAATTT TACCTCGCTG GCGTGGAGCC
GCTCCAATAC AGCGGGCTTT ATGGGCAGGT GATACAGAAA CAGGTGTCAC CATTATGCAG
ATGGATATTG GCCTAGATAC TGGCGACATG CTGCTCAAAA CGCACTTACC GATAGAGGCT
ACGGATACCT CGGCTAGCCT TTATGAAAAG CTAGCAGAAC AAGGGCCAAA AGCCTTAGTA
CAAGCACTGA TTGGTTTAAG TGATGGTAGC CTCAAAGCAC AAAAGCAAGA TGAAACTCTG
GCTAACTACG CTGAAAAATT GTCCAAAGAA GAAGCTCGTC TTGATTGGAA TAAAAGCGCA
AAACAGTTGT GGCAAGACAT TCGCGCCTTC AATCCATGGC CAGTAAGTTA TTTTGAACAC
CAACAAAGCG TGATTAAAGT GTGGCAAGCA GATTACAGCG CAGAACTCTG CTCGCAAGCG
CCAGGAACCA TTATTGCAGC GACCAAGCAA GGTATTGAAA TTGCTACCGC AGAAGGCAAG
TTAATGATTA AAACCATGCA ACTGCCCAAC AAAAAGCCGC TTGATGTGGC CGACATTCTT
AATGCTCGTG GTGATTGGTT TACCGCAGGT GTGTGTTTAA ACCAAGAGGC TAACTAG
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| Protein sequence | MKPLKIIFAG TPDFAARHLQ ALIDSEHDVI ATYTQPDRPA GRGKKLTASP VKALALEHAI
PVFQPASLRN EEAQAELAAL NADIMIVVAY GLILPKVVLD TPRLGCINVH GSILPRWRGA
APIQRALWAG DTETGVTIMQ MDIGLDTGDM LLKTHLPIEA TDTSASLYEK LAEQGPKALV
QALIGLSDGS LKAQKQDETL ANYAEKLSKE EARLDWNKSA KQLWQDIRAF NPWPVSYFEH
QQSVIKVWQA DYSAELCSQA PGTIIAATKQ GIEIATAEGK LMIKTMQLPN KKPLDVADIL
NARGDWFTAG VCLNQEAN
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