| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0019 |
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| Symbol | |
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| ID | 4278296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 23766 |
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| End bp | 24311 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638132757 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_748720 |
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| Protein GI | 114561207 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.827877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAATA TTTTAGTGTT ATATTATTCC CGAGGTGGCC ATACGGCACA TATTAGCCGT
GCAATATCAG AACAAATTCA ATCTAAAGGC GATCATTGTG ATGTCGTTAA TCTTCAAGAT
AAAGCGCCAA TTGAATGGGC CAAATACCAA GCAGTTGCGT TAGGGGCTTG TGTATTATAT
GGCTCGTATC ATAAATCGGT GTTTGAGTTC GTGCGTGAAA ATCAACAGCA TTTATCGCAA
CTGCCAAATA GTTTTTTTTG CGTCAATGTT GTGGCTCGTA ATCCTGAAAA GCGCATTCCT
GAAAACAATA AATATTTACA GAAGTTTTTA ACCTTGTCAG CGTGGCAACC GCAAGATGTG
AAAATTATTG CCGGTAAAGT CGATTATCCT TCTTGGCCTT GGTATGACAG CTTGATGATC
CGCCTTATCA TGAAAATGAC CGATGGCCCC ACCGACCCAA CAGCAATTAT TGATTATACC
GATTGGAATG ATGTGAAGGT TTATGCTGAT CATATTGCCA AGTTAGCGAC AGTCGTACCT
GCGTAG
|
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| Protein sequence | MANILVLYYS RGGHTAHISR AISEQIQSKG DHCDVVNLQD KAPIEWAKYQ AVALGACVLY
GSYHKSVFEF VRENQQHLSQ LPNSFFCVNV VARNPEKRIP ENNKYLQKFL TLSAWQPQDV
KIIAGKVDYP SWPWYDSLMI RLIMKMTDGP TDPTAIIDYT DWNDVKVYAD HIAKLATVVP
A
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