| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0017 |
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| Symbol | |
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| ID | 4277700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 22606 |
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| End bp | 23136 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638132755 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_748718 |
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| Protein GI | 114561205 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.229911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATA CTGTAATTTT ATATTCAACG GTCGATGGGC AAACACTGGC AATTTGTCAG
AAAATTAAGC AAATATTAGT TGAGCAGGGT GAGCAAGTTA GCGTGGTTAA CCTAGCTGAG
GTTGAGGCTG ATGATTTAGC TAGTGTTGAT AAAGTGGTGA TTGGTGCCAG TATTCGATAT
GGCAAACATC GACCTGAATT ATTCAAGTTT GTTGAGCAAC ACAAAGTCCT ACTAGACACT
AAGCACAATA GTTTTTTTAG CGTAAACGTT GTGGCAAGAA AGCCTGAAAA AAACACCCCT
GAAACTAATC CATATATGCA GAAGTTTTCA AATTTATCAG CCTGGAAACC TCAGTTATTA
GGTGTTTTTG CCGGTAAAAT TGACTACCCT CGTTACCGAT TTTTCGATAA GTTTATGATC
CGATTTATCA TGTGGATGAC CAAGGGGCCG ACAGATACTC AGGGTACGTT TGAGTTTACT
GACTGGGGCA AAGTAGATGA CTACGCTAAA CAAATAGCAG CGCAAAAATA A
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| Protein sequence | MLNTVILYST VDGQTLAICQ KIKQILVEQG EQVSVVNLAE VEADDLASVD KVVIGASIRY
GKHRPELFKF VEQHKVLLDT KHNSFFSVNV VARKPEKNTP ETNPYMQKFS NLSAWKPQLL
GVFAGKIDYP RYRFFDKFMI RFIMWMTKGP TDTQGTFEFT DWGKVDDYAK QIAAQK
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