Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0009 |
Symbol | |
ID | 4277692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 11162 |
End bp | 14344 |
Gene Length | 3183 bp |
Protein Length | 1060 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638132747 |
Product | amidohydrolase |
Protein accession | YP_748710 |
Protein GI | 114561197 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACTC AAAAACTCAC CCCACTTTAC ACCGCAATAG CACTGACCCT TGGTATTTCT GGTTTTGCTT ATGCCGAAAA TGACAAAGTA AAATGGCATG TAAATGCTCC TGAAAATGCG CCATTAAGTA AAATAGATAT CAATGTTACC GAAGGAACAT GGATGAACGT CAATGTATCA CCTGATGGTG AACACATTGT ATTTGATTTA TTAGGTGATA TTTATCAAAT ACCGATAGCA GGAGGAGAAG CTAAACCACT GGCACAAGGT ATCGCTTGGC AAATGCAGCC AGTATATAGC CCAGACGGTA AGTATATAGC TTTCACCTCT GATGAAGATG GTGGCGATAA TATTTGGATA ATGAATGCCG ATGGTACCAA TCCACATGCA ATAACGACTG AAACGTTTCG TTTACTCAAC AGCCCGGCTT GGAGTCCTGA CTCACAGTAT TTAGTGGCAA GAAAACACTT CACTGGTACT CGCAGCTTAG GAGCCGGTGA AGTGTGGATG TTTCACGTTG CTGGTGGCGA AGGAGTTAAA CTAACTGAAC GCCCTAATGA ACAAAAAGAT TTGGGTGAAC CAGCCTACTC GCCAGATGGA CGCTATATCT ACTTTAGCCA AGATTCGACC CCAGGCAAGA CCTTTCATTA CTCAAAAGAT TCTGTGAAAG GCATCTATAA GATTAAGCGT TATGACACCC AAACAGGCGA TATTGAAGTA TTGATTGAGG GCACCGGTGG TGCAATTAGA CCGACACCAA GTCCTGATGG CAAAACCCTT GCCTACATCA AACGCGATGG ATTCCAGTCG ACCTTATATA CCCTAGACTT AAAGTCTGGT GAAGAAACCA AGCTGTATGA CAAACTCGAT CGTGACATGC AAGAAACATG GGCTATTCAC GGTGTTTATC CAACAATGTC GTGGACTAAA GACAATAAGC ACATCGTATT TTGGGCTAAA GGTAAAATCA ATAAACTTGA TGTCGACAGT AAACAAGTAA CAGACATTCC ATTCAGTGTT AGCACTCAAA GAGATATTCA GCCATCGGTC CGCTTTACTC AAAACTTAGA TAAAGATGAA TTTGATGTAA AAATGCTGCG TATGGCACAA GTATCACCAG ATGGCGAAAA AGTGGTATTT GAAGCCTTAG GTAAAATTTG GGTTCGTGAT ATTAAAGACG GAAAACATAA ACGATTAACC CGTTTAGATG ATGACATCAA TGAGCTATTC CCACAGTGGT CACGTGATGG TAAAGACATC GTGTTCACTA CATGGAATGA TCAACAGCAA GGCACCGTCA GTGTTGTTAG CGCCAGAGGT GGTAAAGCCA AGGTGTTAAC CAACGAGCCG GGCAAATATG TAGAGCCAAC TTTTTCGCCT GATGGCGAAT ATATTGTTTA TCGAAAAGCT CGCGGTGGAT ACATGACACC ACGAACTTGG TCACAAGAAC CGGGTTTATA TAAAGTCGAT ATAAAAGGAA AGCAAAGCAC TAAACTAACT GCCAGTGGCC ATCAACCACA ATTTGGTAAC GACTCAGATC GTGTTTACTT TATGGATTCA GGTGAGACCC CAGAGTTTGC ATCAATCGGT ATGAACGGTT TTGAAAAACG AACCCATTAC ACCAGCGACC ACGCTACCGA GTTTCGTTTA TCACCAAACG GCGAGCACCT AGCTTTTGCA GAGCGCTTTA GAGTGTACGT CACTCCTTTT GCGAAACACG GCGAAACCAT TGCTATTGGA CCTAAAGCAA GCAACTTACC CATTACCCAA TTAAGTGCTC GTGCCGGCGA AAGCATTAGC TGGAACGGTA AAAATAACCA ACTGTATTGG ACATTGGGCC CTGATTTATA CCAAGCCGAT GTCGACACTC AATATACAAA ATCTGAAACC AAGGTCGATC CCAAAATAAC CTCTATTGGC TTTAAAGATA AGGCCGATGT TCCACGTGGA ACAGTTGTGT TTACTGGCGG TAAAGTTATC ACTATGGAGA ATGATCAGGT TATTGATAAT GGCGTTGTTA TCGTTAAAGA CAATAAAATT GTCAGCGTTG GTGATGCCAA TACGATTATT CCTAAAAATG CTCAAGTCAT CGATATTAGC GGTAAAACCA TTATGCCTGG CATATTTGAT GCCCATGCAC ATGGCGGCCA AGCAGATGAT GAAATTATTC CACAGCAAAA CTGGGCCTTA TATTCTGGCT TATCACTTGG GGTAACATCT ATTCATGATC CATCGAATGA CACAACCGAA ATTTTTGCTG CTTCCGAACA ACAAAAAGCA GGCAATATTG TTGGACCACG TATTTTCTCA ACAGGGACTA TTTTATACGG CGCCAACTTA CCAGGTTATA CCTCGCATGT AGATTCACTT GATGATGCAA AGTTTCACTT AGAACGTCTT AAAAAAGTCG GTGCGTTTAG TGTTAAGAGT TACAACCAGC CACGTCGAGA TCAACGACAA CAGATAATTG CTGCTGCACG AGAACTCGAA ATGATGGTAG TCCCTGAAGG TGGCAGTTTG CTGCAGCACA ATTTATCTAT GATAGCGGAT GGTCACACCA CGGTAGAACA TTCGTTGCCA GCGGCTTCTA TTTATAATGA CATCAAACAA TTTTGGAGCC AAACAGAAGT TCACTACACA CCGACCTTAG TTGTCGCATA TGGCGGTATT TCTGGCGAGC ATTACTGGTA TGACAAAACT GATGTTTGGG CTCACCCTCG CCTAAGCATG TATGTTCCGC ATGATATTCT TGATGCCCGT TCAATGCGCC GCACGACCGC GCCAGACGAA CATTACAACC ATTTTAATGT TGCCCGCGTA GCAAATGAGT TAAACAACAT TGGCGTTAAA CCCAATATTG GTGCTCACGG TCAACGAGAA GGATTGGCTG CACATTGGGA GATGTGGATG TTTGCTCAAG GCGGTATGAG TAATATGGAA GTATTAAAAA CAGCGACTAT TAACCCTGCC GTCACCTTCG GTATGGATCA TCAACTGGGT TCTATTAAAG TTGGTAAATT AGCGGACTTA ATAGTGATTG ATGGCGATCC ATTAGCTGAT ATAAGAACGA CTGATAAAGT CACTTACACC ATGGTCAATG GTAAGTTATT TAATTCAGAA ACCATGAATC AGCTAAATGG TGATAAACAT AAACGTAAGC CATTTTTCTT TGAAAAAATC TAA
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Protein sequence | MLTQKLTPLY TAIALTLGIS GFAYAENDKV KWHVNAPENA PLSKIDINVT EGTWMNVNVS PDGEHIVFDL LGDIYQIPIA GGEAKPLAQG IAWQMQPVYS PDGKYIAFTS DEDGGDNIWI MNADGTNPHA ITTETFRLLN SPAWSPDSQY LVARKHFTGT RSLGAGEVWM FHVAGGEGVK LTERPNEQKD LGEPAYSPDG RYIYFSQDST PGKTFHYSKD SVKGIYKIKR YDTQTGDIEV LIEGTGGAIR PTPSPDGKTL AYIKRDGFQS TLYTLDLKSG EETKLYDKLD RDMQETWAIH GVYPTMSWTK DNKHIVFWAK GKINKLDVDS KQVTDIPFSV STQRDIQPSV RFTQNLDKDE FDVKMLRMAQ VSPDGEKVVF EALGKIWVRD IKDGKHKRLT RLDDDINELF PQWSRDGKDI VFTTWNDQQQ GTVSVVSARG GKAKVLTNEP GKYVEPTFSP DGEYIVYRKA RGGYMTPRTW SQEPGLYKVD IKGKQSTKLT ASGHQPQFGN DSDRVYFMDS GETPEFASIG MNGFEKRTHY TSDHATEFRL SPNGEHLAFA ERFRVYVTPF AKHGETIAIG PKASNLPITQ LSARAGESIS WNGKNNQLYW TLGPDLYQAD VDTQYTKSET KVDPKITSIG FKDKADVPRG TVVFTGGKVI TMENDQVIDN GVVIVKDNKI VSVGDANTII PKNAQVIDIS GKTIMPGIFD AHAHGGQADD EIIPQQNWAL YSGLSLGVTS IHDPSNDTTE IFAASEQQKA GNIVGPRIFS TGTILYGANL PGYTSHVDSL DDAKFHLERL KKVGAFSVKS YNQPRRDQRQ QIIAAARELE MMVVPEGGSL LQHNLSMIAD GHTTVEHSLP AASIYNDIKQ FWSQTEVHYT PTLVVAYGGI SGEHYWYDKT DVWAHPRLSM YVPHDILDAR SMRRTTAPDE HYNHFNVARV ANELNNIGVK PNIGAHGQRE GLAAHWEMWM FAQGGMSNME VLKTATINPA VTFGMDHQLG SIKVGKLADL IVIDGDPLAD IRTTDKVTYT MVNGKLFNSE TMNQLNGDKH KRKPFFFEKI
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