| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0007 |
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| Symbol | glyQ |
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| ID | 4277690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 9516 |
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| End bp | 10421 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132745 |
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| Product | glycyl-tRNA synthetase subunit alpha |
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| Protein accession | YP_748708 |
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| Protein GI | 114561195 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACGA AACACGACGT AAAGACATTT CAGGGTTTCA TCCTAACCCT TCAGGAATAT
TGGGCGCAGC AAGGTTGCGC AATTGTTCAA CCTCTAGATA TGGAAGTTGG CGCTGGTACT
TTCCACCCGC AGACGTTCTT ACGTTCATTA GGCCCTGAGC CAATGAGCAG TGCATACGTG
CAACCGTCTC GCCGTCCTAC TGATGGACGT TATGGTGAAA ACCCAAACCG CCTGCAACAT
TACTACCAAT TTCAAGTAGT GCTAAAGCCA TCTCCAGATA ACATTCAAGA GCTTTATTTA
GGCTCACTTG AAGCGCTTGG CATCGACACC AAAGTACATG ACATTCGCTT TGTTGAAGAC
AACTGGGAGT CGCCAACATT AGGTGCTTGG GGTTTAGGCT GGGAAATTTG GCTTAATGGT
ATGGAAGTGA CTCAGTTCAC CTACTTCCAA CAAGTTGGCG GAATTGAATG TAGTCCTGTT
ACAGGTGAAA TCACTTACGG GCTTGAGCGT TTAGCCATGT ACATTCAAGA AGTTGATAGC
GTATATGATC TTGTTTGGAC TGACGGACCA CTTGGTCGTG TCACTTATGG TGACATTTTC
CATCAGAACG AAGTAGAACA GTCTACCTAT AACTTCGAAC ATGCCGATGT CGATTTTATG
TTCACCCTAT TCGATCAATG TGAAAAAATG TGCATGCACT TACTATCACT AGAAAAGCCA
TTACCACTAC CTGCTTACGA GCAAGTAATG AAAGCATCAC ACGCTTTTAA CTTACTTGAT
GCTCGCCATG CTATATCAGT CACTGAACGT CAGCGTTATA TCCTTCGCGT TCGTACTATG
GCAAAAGGTG TTGCAGAATC TTATTATCAA GCACGTGAAG CTCTTGGCTT CCCAATGTGT
AAGTAG
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| Protein sequence | MTTKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRSL GPEPMSSAYV
QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLEALGIDT KVHDIRFVED
NWESPTLGAW GLGWEIWLNG MEVTQFTYFQ QVGGIECSPV TGEITYGLER LAMYIQEVDS
VYDLVWTDGP LGRVTYGDIF HQNEVEQSTY NFEHADVDFM FTLFDQCEKM CMHLLSLEKP
LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKGVAESYYQ AREALGFPMC
K
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