Gene Mlg_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2789 
Symbol 
ID4269723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp3172063 
End bp3172722 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID638127551 
ProductGntR family transcriptional regulator 
Protein accessionYP_743619 
Protein GI114321936 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000064922 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGAA CACTCAAATC ACCAGCGTTG TACAGCCAGG TCGCGGACCT GGTGCGGAAA 
CGTATCTTCC AGCAGGAGCT GCGCCCGGGG GATCGCATCG ATGAGGTGAC CCTGGCCGAG
GAACTGGGCG TGAGCCGCAC GCCGGTCCGC GAGGCGTTGA AGATCCTGGA TGCCGATGGG
CTGGTCATCC TTGAGCCGCG TCGCGGCTGT CGGGTCCGGG TGCTGGAGCA CAAGGACCTG
GAGCAGTTGT TTCCGGTCAT GGCGGTACTG GAGGGGCTGA TTGCCGGCGA GGCGGTGAAG
CGCACCGACG GGAAGGAGAT GGCGAACCTG GAGCGTATCC ACCAGAACCT GGAGGACGCC
GCCGCGGAGG GCGACATCGA CCGTTACTAC GAGCACAACT ACGAGTTTCA CACCCGCCTT
CAGGAGTTGT GTGGCAACCC CTACCTGCAG CGGGTGGCCG CCGACCTGCG GCGGATTCTG
ATTCTCGCCC GCCACCGCCA GCTCAAGGCC CCCGGCCGCC TACAGGACTC GCTGCAGGAG
CACCGCGACC TAATGGCGGC CTTCCGTAAG GGCGATGCCG AAGCCGCCGA TGCGCAGATG
AAGCACCACC TGCTGGAGCA GGGCCGGACG CTGATGGAAA AGGAGGCCGC CCGCCACTGA
 
Protein sequence
MVGTLKSPAL YSQVADLVRK RIFQQELRPG DRIDEVTLAE ELGVSRTPVR EALKILDADG 
LVILEPRRGC RVRVLEHKDL EQLFPVMAVL EGLIAGEAVK RTDGKEMANL ERIHQNLEDA
AAEGDIDRYY EHNYEFHTRL QELCGNPYLQ RVAADLRRIL ILARHRQLKA PGRLQDSLQE
HRDLMAAFRK GDAEAADAQM KHHLLEQGRT LMEKEAARH