Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2779 |
Symbol | |
ID | 4269713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 3156299 |
End bp | 3161149 |
Gene Length | 4851 bp |
Protein Length | 1616 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638127541 |
Product | glutamate dehydrogenase (NAD) |
Protein accession | YP_743609 |
Protein GI | 114321926 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGAGGAA GCGGAATGGT CTACGCCGTC GACCGGGAGC ACGAGGAACT CATCCAGGTA GTCGTCGACC AAGTGGAACA GCGCTGGCCC CGGGAGCGGG CAGACGATGT AGCCGCCTTC CTGCGCCTGT ACTATGAGGA CGCCTCCCCC GAGGACCTGA CCCAGCGCAA TCCTGCCGAC CTCTACGGCG CCGCCATCTT CCATTGGCAG CTGGCACAGA AACGCCGCCC GGGCATCCCC CTCATCCAGG TCTATAACCC GTCACCGGAA CGCCACGGCT GGGAGTCGAC CCACACCATC GCCCAGGTGG TCACCGATGA CATGCCTTTC CTGGTGGACT CCCTGTCCCT GGCGATGAAC CGCCTGGGCC TCACCCTGCA CCTGGTGATC CACCCGGTCA TGGAGGCCAC CCGCGACGGC AACGGCCGGC TCCAGGCCGT CCGGGCACTG GACCCGGACG CCCAGGCCGT TCAAGGCGCC GAGGCCTTCA TGCACTTCGA GGTGGACCGC CAGTCCGGCG ACGAGGCGTT GAACGCCCTG CGCGAAGAAC TGGAAAAGGT CCTGCGAGCG GTTCGCCACG CCGTGGAGGA CTGGCAACCC ATGCGTGAGC GCATGCGCCG TTGCATCACC AATCTCAAAC GCAATCCGCC GCCCGAGAAC GACGACGACC TGAGCGAGGT CTGCGACTTC CTGGACTGGC TGTCGGACAA CCACTTCACC TACCTGGGCT ACCGCAAGTA CGACCTGCGC GAGGAGCGCG GCGAACTGCA GCTGCGTCCC CAGCGGGAGA CCGGCCTGGG CATTTTGCGC GACCGCGAGG GTGGCCGCTC CACCAGTTTC TCCACCCTGC CGGCAGCGGT CCGGCGCAAG GCGCTGGAGC CCTGCCCGTT GGTGATCACC AAGTCCAACT CCCGCTCCCT GGTCCACCGG CCGGGCTACA TGGACTACAT CGGCATCAAG CGCTACGACC GCAACGGTAA GGTCATCGGC GAACACCGAT TCCTGGGGCT GTACACCTCC GCCGCCTACA ACCGTAACCC GCGCGCCATC CCGCTGTTAC GCCAGCGCAT CCAGCGGGTG ATCGACCGCT CCGGGCTGCA CCCGCGCAGC CACGCGGGCA AGGCGCTGGT CAACATCATG GAGACCTACC CCCGCGACGA GTTGTTCCAG ATCAGCACCG ACACGCTCTA CCGTACGGTG CTGGGTATCC TCCACCTGCA GGAACGCCAG CGGGTGCGGC TGTTCGCGCG CCACGACGAC TACCAACGGT TTGTCTCCTG CCTGGTGTAC GCCCCGCGCG AGCGCTACAA CACCGAGGTG CGCGAGCAGA TGCAGGCCAT CCTGCAGGAG GAGCTGGGCG GCACCCGCAG TGAGTTCACC GTGCAGTTGT CCGAGTCGGT GCTGGCGCGC ATCCACTTCA TCATCCGCCT GGACCGCCCG GGCATCCCCG AGTACGACAC CGCGGCGTTG GAGCGGCACC TGGCCGCCAC CATGCGTTCC TGGCGCGACG ACCTGCACGA TGCGCTGGTG GAACACTTCG GCGAGGAGGT CGGCAACGCC CTGCACACCC GCTACGGGCG CGCCTTCAGC GCCGCCTACC GCGAGGACGT CTCGCCGCGC ACCGCCGTGC TGGACGTTTC GCGCATGGAG CGCCTGGAGG CGGGCGATCT GGCCATGAGC CTCTACCGGG CGCTGGAGGC ACCGCCGGAC GAGCTGCGGC TCAAGCTGCT CAAGCTGGGC GACCCGATCG TGCTTTCCGA CGCCCTGCCG GTGCTGGAGA ACATGGGCGT CGAGGTGCTG GACGAGCGAC CCTACGAGGT CCGTCCGGCG GATCGGCCCA CCGGCTGGAT GCACGACTTC GGTCTTCGCT ACCCGGGCGC CGAGGACCTC AACCTCGATA CCGTGCGTGA GCCCTTCCAG GAGGCCTTTA TCCGCGTCTG GCACGGGGAA CTCGAGGACG ACGGCTTCAA TCGCCTGATC CTGGCCGCCC GGCTCAAGCC CCGCGAGGTA GTGATCCTCC GCGCCTACTG CAAATACCTG CGCCAGGCCG GCACCCCCTT CAGCCAAAGC TATATCGAGG ACACCCTCAG CCGTAACGCC GAGATCGCCC GGCTGCTGGT GCGGATGTTC CGCGCCCGCT TCCACCCGCG GTATCAGGAC GCCCGACGCG AGGCCCGCCT GGCCACCGAG ATCGACACCG CGCTGCGCGA CGTGGCGAGC CTCGACGAGG ACCGCATCCT GCGCCGCTAC CTGGCCGCCA TCCAGGCCAC CCGCCGGACC AGCTACTACC GCGGCGTGGC GGCGGGCGAA CCGGTAGAGC ACATCGCCTT CAAACTCAGC CCCGAGACCA TCCCCGGCGT GCCGAGGCCC CACCCCTGGG CGGAGATCTA CGTCTACTCA CCGCGGGTGG AGGGGGTGCA CCTGCGGGGC GGGCCAGTGG CCCGGGGCGG GCTGCGCTGG TCGGACCGGC GTGAGGATTT CCGCAGTGAG ATCCTGGGCC TGATGAAGGC GCAGACGGTG AAGAACGCGG TGATCGTACC GGTGGGCGCC AAGGGCGGGT TCGTAGTCAA ACGCCATCTT CAGGACCGCG AGGCCATGGC CGACGAGGTA CGCCGCTGCT ACCAGGGCTT CATCCGCGCC CTGCTCGATG TCACCGACAA CCGGGTGGCC GGCGAGCTGC AACCACCGCC GGAGGTGGTG CGCCATGACG CCGACGACCC CTACCTGGTG GTGGCGGCGG ACAAGGGGAC GGCCACCTTC TCCGACCTGG CCAATGCCAT CGCCGCTGAG TACGACTTCT GGCTGGGCGA TGCCTTCGCC TCCGGTGGTG CCCACGGCTA CGATCACAAA AAGATGGGCA TCACCGCCCG CGGTGCCTGG GAGGCGGTCA AGCGCCACTT CCGCGAACTG GGCCGGGATA TCCAGAACGA GCCCTTCACG GTCGCCGGCA TCGGCGACAT GTCGGGCGAT GTGTTCGGCA ACGGCATGCT CCTCTCCCGC CACATCCGCC TGGTGGCGGC CTTCGACCAC CGCCACATCT TCATCGACCC CGACCCCGAT GCCGAAACCG GCTACGCGGA ACGGGAGCGC CTGTTCCGCC TGCCCCGCTC CTCCTGGGCG GACTACGACA AGGCCCTCAT CTCCGAGGGT GGCGGGGTAT GGCCGCGCAG CGCCAAATCC ATCCCCCTGA CTCCGCAGGT CCGCCAGGTG CTGCAGATCG ATGCCCAGCA GCTCACCCCA GCGGAGCTGA TCCGCGCCAT TCTCGCCGCC CCCCTGGACC TGCTCTGGAA CGGCGGCATC GGCACCTATG TGAAGGCCAG CGCCGAGAGC CACACCGATG TGGGCGACCG CAGCACCGAG GACACCCGCA TCGATGCCAG CGAGCTGCGG GTCAAGGTCT TCGGCGAAGG CGGCAACCTG GGGATCACCC AGCGCGGCCG CATCGAGTTC GCGCGCCGCG GCGGGCATAT CAACACCGAC GCCATCGACA ACTCCGGTGG TGTCGACTGC TCCGACCACG AGGTCAACAT CAAGATCCTG CTCAAGGAGG TGGTGGACGA CGGCGACCTC ACCGTCAAGC ACCGCAACCA GTTGCTCGAG GACATGACCG AATCGGTGGC CGAGTTGGTG CTGGCGGACA ACTACGCCCA GACCGGCGCC CTGTCACTGG CGGAAGCCGC CGCCCCGGAG TTGCTCAACG AGCAGGTCCG CTTCATCCGC CGGCTGGAGC GGGACGGTCG GCTGAACCGC CGACTGGAGG CACTACCCGA CGAGGAAGAG CTGGCCGAGC GGGCCGCCGC CGCACAGGGC CTTACCCGGC CGGAGACAGC GGTGCTGCTG GCCTACGGCA AGATCGTCGC CCAGGAGGCC CTGGCCCACT CCGATCTGCC GGAGGAGGCC TGGCTGCAGG ACGTGTTGCA CGCCTACTTC CCCGCCCCGA TCCGTGAACG CTGGGGTGAC CGGATCGCCA GCCACCGGCT GCGCCGGGAG ATCATCGCCA CCCAGGTGGC CAACCTGTTG ATCAACCGCC TGGGGCCCAC CTTTTTCTTC CGCATGGGGG AGAAGGCCAG CGCCCCCGCC GACGCCGTGA CCCGGGCGGC CTACGCGGCG ATGGAGGTCT TCGCCCTGGA CGGTCTGTGG CGGGCGGTCT GCGCCCTGGA CACCCGGGTG GCGGCCAGCC ACCAGCGGAC GATGCTCAGC ACCGTGCAGG CACTGCATGA GCGGGCCACG CTCTGGCTGC TGCGCAACCT GGGCACGCGA CTGGACATCG GCGAGACCGT CCAGCGCATG CAACCCCAGG TGGCCAACCT GCAGCCCCGG CTGCTGGCCC TGCTACCAAT ACAGGACCGC GAGGAGCTGG AGGGCCGTGC CGGGACCCTG GCGTCCGGGG ACGTCCCCGC GGAACTAGCG CGCCAGGCGG GCACCCTGGA GGCGCTCTAC CCCGCGCTGG ACCTGGTCAA GGTGGCCCAG GAGACGGACT GCGACCTGGA GCGGGTGGCC GCACTCTACT TCGGCCTGGC CCAGCAGCTG GGGCTGGATT GGCTACGCCG TGCCATCACC AGCTTCGTCC CGGCCGACGC CTGGCAGGAG CGGCTACGCC TGGGCCTGGA AGAGGACTAC TACCAGCATC TGCGCGAGCT GACCCGCGAC CTGGTGCGCG ACAGCGACCC GGCGGCCGCA CCAGAGGAGT GTCTGTCGCA GTTCCTCAGC GACTTCGGCC CGGCGGTGGA CCGGGTCGAG CAGCTGCTCT CGGAGCTGCG CTCGGTGGGC CACGTGGAGC TGCCGATGCT GGCGGTGACC ACCCAGGAGC TGAAGAACCT GGCCCAGGCC GGGGCGGCCT CCGGGCCTTG A
|
Protein sequence | MGGSGMVYAV DREHEELIQV VVDQVEQRWP RERADDVAAF LRLYYEDASP EDLTQRNPAD LYGAAIFHWQ LAQKRRPGIP LIQVYNPSPE RHGWESTHTI AQVVTDDMPF LVDSLSLAMN RLGLTLHLVI HPVMEATRDG NGRLQAVRAL DPDAQAVQGA EAFMHFEVDR QSGDEALNAL REELEKVLRA VRHAVEDWQP MRERMRRCIT NLKRNPPPEN DDDLSEVCDF LDWLSDNHFT YLGYRKYDLR EERGELQLRP QRETGLGILR DREGGRSTSF STLPAAVRRK ALEPCPLVIT KSNSRSLVHR PGYMDYIGIK RYDRNGKVIG EHRFLGLYTS AAYNRNPRAI PLLRQRIQRV IDRSGLHPRS HAGKALVNIM ETYPRDELFQ ISTDTLYRTV LGILHLQERQ RVRLFARHDD YQRFVSCLVY APRERYNTEV REQMQAILQE ELGGTRSEFT VQLSESVLAR IHFIIRLDRP GIPEYDTAAL ERHLAATMRS WRDDLHDALV EHFGEEVGNA LHTRYGRAFS AAYREDVSPR TAVLDVSRME RLEAGDLAMS LYRALEAPPD ELRLKLLKLG DPIVLSDALP VLENMGVEVL DERPYEVRPA DRPTGWMHDF GLRYPGAEDL NLDTVREPFQ EAFIRVWHGE LEDDGFNRLI LAARLKPREV VILRAYCKYL RQAGTPFSQS YIEDTLSRNA EIARLLVRMF RARFHPRYQD ARREARLATE IDTALRDVAS LDEDRILRRY LAAIQATRRT SYYRGVAAGE PVEHIAFKLS PETIPGVPRP HPWAEIYVYS PRVEGVHLRG GPVARGGLRW SDRREDFRSE ILGLMKAQTV KNAVIVPVGA KGGFVVKRHL QDREAMADEV RRCYQGFIRA LLDVTDNRVA GELQPPPEVV RHDADDPYLV VAADKGTATF SDLANAIAAE YDFWLGDAFA SGGAHGYDHK KMGITARGAW EAVKRHFREL GRDIQNEPFT VAGIGDMSGD VFGNGMLLSR HIRLVAAFDH RHIFIDPDPD AETGYAERER LFRLPRSSWA DYDKALISEG GGVWPRSAKS IPLTPQVRQV LQIDAQQLTP AELIRAILAA PLDLLWNGGI GTYVKASAES HTDVGDRSTE DTRIDASELR VKVFGEGGNL GITQRGRIEF ARRGGHINTD AIDNSGGVDC SDHEVNIKIL LKEVVDDGDL TVKHRNQLLE DMTESVAELV LADNYAQTGA LSLAEAAAPE LLNEQVRFIR RLERDGRLNR RLEALPDEEE LAERAAAAQG LTRPETAVLL AYGKIVAQEA LAHSDLPEEA WLQDVLHAYF PAPIRERWGD RIASHRLRRE IIATQVANLL INRLGPTFFF RMGEKASAPA DAVTRAAYAA MEVFALDGLW RAVCALDTRV AASHQRTMLS TVQALHERAT LWLLRNLGTR LDIGETVQRM QPQVANLQPR LLALLPIQDR EELEGRAGTL ASGDVPAELA RQAGTLEALY PALDLVKVAQ ETDCDLERVA ALYFGLAQQL GLDWLRRAIT SFVPADAWQE RLRLGLEEDY YQHLRELTRD LVRDSDPAAA PEECLSQFLS DFGPAVDRVE QLLSELRSVG HVELPMLAVT TQELKNLAQA GAASGP
|
| |