| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2759 |
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| Symbol | |
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| ID | 4269120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 3130822 |
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| End bp | 3132906 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638127521 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_743589 |
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| Protein GI | 114321906 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.354322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCCA AAGCCATCTC AGGACGAAGC GGCGCCGCAC CGGACCGCCT CCAGGGGCTG
TTCATCGGGC TACTGGCCCT CACGGCGCTC GCCTGCGGGC TCACCCCTGT GCAGGCCGGA
GCCGCCACCG TCAACCTCAC CGACATGGAG TACACCACCG CCCCGGGCAA CCGGGTGGAG
CTGATCCTAA CGCTGGACGG CGAACCGCCG GAGCCGGGCA GCTTCACCAT CAGCAACCCG
GCGCGCCTGG TGGTGGACCT GCGCGACACC CGCAACCGGC TGGCCGAACG GGCGCTGGAG
ATCGACACCG GCAACGTGCG CCGGGTCACC ACCACCGAAT CCGGCGACCG CACCCGGTTG
GCGATCCAGC TCAGTCGCTT GGTGGATCAC GCCATCCGGG TGGAGGGCAA CCAGATCTTC
ATCACGCTGG ACGGGGGCAC CGGCGCCGCC GCACGCATCG GGCGCGACCA CGAACCGCGC
GAGCGTACCA CCCGCAGCCA GATCGAGGAC ATCGACTTCC GGCGTACCCC GGACGAGGGC
GGGCGCATCA TCATCGCCCT CAGTGACGGC CGCGCACCGG TGCGCATGGA CGAGCGCTCC
GACCGGGTGG TGCTGGAGTT CCCGGGCAGC CGCGTGCCCG AGGAGCTGCG GCGCCGGCTG
GATGTCACCG ACTTCGCCAC CCCGGTGCAG ATGATCGAGA CCCGGCAACA GGACGACCGG
GTGCGAATGA CAGTGACTGC CCGCGGCCCC TTCCGCACCG CCGGCTATCA GACCGCCGAC
AGCTTCACCC TGGAGATCGA CCCGCGCATC GATGACGAGG AGGTGGACGA ACCCACCTAC
ACCGGCGACC CCATCACCCT CGATTTCCAG GACGTCGAGG TGCGGCGGGT GCTGCAGATC
CTCGCCGACT TCAACGACAT GAATGCGGTG ATCAGCGACA GTGTGGACGG CCGCCTGACA
CTGCGCCTGG TGGAGGTCCC CTGGGACCAC GCCCTGGAGA TCATCCTCGA GGCCCAGGGC
CTGGACGTCC GTGAGCGCGG CAACGTACTC ACCTTCGCCC CCACCGAGGA GCTGGCCGCC
CGCGACCGGG CCCGTGAGGA GGCCCGCCGC ACGGTGGACG AGGTCGCCCC GCTCAGCTCG
GCCTTCATCC AGGTCAACTA CGCCCGCGCC GAGGACATCG CCAACCTGCT GAAGGGCGAC
GAGACCAGCC TGCTCTCCGA ACGCGGCCAG GTGGCGATCG ACGAGCGCAC CAACCTGCTC
ATCGTGCAGG ATATGGAGCG CAACATCGAC GACATCCGCA ATCTGGTGAA CCGGCTGGAC
ATCCCGGTGC AGCAGGTGCT GATCGAGTCG CGCATCGTCA TCGCCGACGA CGACTTCTCG
CGCGACCTGG GCGTCCGCTT CGGCTACACC GCCACCGGCA GCCTGGGCAG CGAGGGCACC
GCCATCGGCG CCCGCCCCAC CCCCACGCCC GGCATTGACG GCACCGATGA CCTGATGGTG
GATCTGCCTG CCCCGGCAGA GGCCCCGCGA CTCGGCCTGG CCATCGGGCG CATCGGTGAC
CGCCTGCTCC AGTTGGAGCT GTCGGCCATG GAGACCGAGG GGCGCGGCGA GGTCATCTCC
AGCCCGCGGG TCATCACCGC CAACCAGCGG GAGGCCAACA TCCGCCAGGG CGTGGAGATC
CCCTACCAGG AGGAGACCGC CAGCGGCGCC ACCAACGTGG AGTTCAAGGA GGCGGTGCTG
GGCCTCACGG TCACCCCGCA GATCACACCG GATGACCGGG TCATTATGAA CCTGGAGGTC
TCCAACGACA CCGTGGGCGA GGTCTTCGCC GGGGTGCCCA GCATCGACAC CCAGTCGGTC
ACCACCCAGG TCCTGGTGGA CAACGGCGAG ACCGTGGTGC TGGGCGGGGT CTACGAGCGG
GCCAGCGGCG AGCAAACCCG GCGCGTGCCC TTCTTCGGGA GCCTGCCGGG GGTGGGCTGG
CTGTTCCGCA ACCGCCTGAC CTTCGACGAA CAGTCCGAGC TGCTCGTCTT CGTCACCCCG
CGCATCCTGG ACGAATCGCT GAATGCGCGT AACGCGGGGC AATAA
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| Protein sequence | MFAKAISGRS GAAPDRLQGL FIGLLALTAL ACGLTPVQAG AATVNLTDME YTTAPGNRVE
LILTLDGEPP EPGSFTISNP ARLVVDLRDT RNRLAERALE IDTGNVRRVT TTESGDRTRL
AIQLSRLVDH AIRVEGNQIF ITLDGGTGAA ARIGRDHEPR ERTTRSQIED IDFRRTPDEG
GRIIIALSDG RAPVRMDERS DRVVLEFPGS RVPEELRRRL DVTDFATPVQ MIETRQQDDR
VRMTVTARGP FRTAGYQTAD SFTLEIDPRI DDEEVDEPTY TGDPITLDFQ DVEVRRVLQI
LADFNDMNAV ISDSVDGRLT LRLVEVPWDH ALEIILEAQG LDVRERGNVL TFAPTEELAA
RDRAREEARR TVDEVAPLSS AFIQVNYARA EDIANLLKGD ETSLLSERGQ VAIDERTNLL
IVQDMERNID DIRNLVNRLD IPVQQVLIES RIVIADDDFS RDLGVRFGYT ATGSLGSEGT
AIGARPTPTP GIDGTDDLMV DLPAPAEAPR LGLAIGRIGD RLLQLELSAM ETEGRGEVIS
SPRVITANQR EANIRQGVEI PYQEETASGA TNVEFKEAVL GLTVTPQITP DDRVIMNLEV
SNDTVGEVFA GVPSIDTQSV TTQVLVDNGE TVVLGGVYER ASGEQTRRVP FFGSLPGVGW
LFRNRLTFDE QSELLVFVTP RILDESLNAR NAGQ
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