| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2687 |
|---|
| Symbol | |
|---|
| ID | 4269563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 3045707 |
|---|
| End bp | 3048172 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638127447 |
|---|
| Product | regulator of chromosome condensation, RCC1 |
|---|
| Protein accession | YP_743517 |
|---|
| Protein GI | 114321834 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.00360144 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTA TTGCCCCGCC CTTCCGCCTC CTGAGCGTTG GCCTGATCCT CCTCCTCATG
GCCCTGCTCA CCGCCTGCGG CGGCGGGAGC TCCAGCACCG ACGACACCTC CGAGGACACT
TACGCGGTCG GCGGCACCCT CACCGGGCTT GAGCAGGGCC ACACCATCAC CCTGCAACTG
AACGGCGCTA GTGACCTGAC GCTGGACCAC ACCGCCAACG ACAACCCCTA CAGCTTTGCT
GTCAAACTGC CCCACGGCAG CGCCTACGAG GTGACCCTCC CCGCCGAACC GCCGCAGCAC
CACTGCACCA TCCACAACGC CACCGGCACG GTGGATGGCG CAGTGATGAA CGTGGATGTC
GAGTGCACCG CCTTTCCCGT TCTCGCCGCG GGTGGTGTGC ACACCCTGGC GATGAAGGCT
GATGGCACCC TCTGGGCCTG GGGTCAGAAC AACGTGGGGC AGCTCGGTCT GGGCGATACC
GAAAAGCGCG ATACACCGGC GCAGGTGGGC AGTGACACCG ACTGGGCCGC GGTGAGCGCA
GGGGGTGCCT ACACCCTGGC CGTCAAGGAC GACGGCACCC TCTGGGCCTG GGGCGAGAAC
TACTTCGGCC AGCTCGGCCT GGGCGATACC GACGACCGCC ACGCGCCGGA GCAGGTGGGC
AGCGACAGCG ACTGGGTCGC AGTCAGCGCG GGGCGGCACC ACACCCTGGC CCTCAAGGCC
GATGGCACCC TCTGGGCCTG GGGCAGGAAT TACTTCGGCC AGCTCGGTCT GGGGGGGACC
ACCAATCGCA ATGCGCCGGA GCAGGTGGGC AGTCACAGCG ACTGGGCCGG AGTGATCGGG
GGCGACCGAC ACAGCCTGGC TGTCAGGGAA GACGGCACCC TCTGGTCCTG GGGTCAGAAC
AACGTGGGGC AGCTCGGCCT GGGTGATACC GTTGAGCGCC GAAGGCCGGA GCAGGTGGGC
AACGACAGCG ACTGGGCCAC AGTGAGTGCG GGCTTGCTTC ACACCCTGGC CGTCAAGAAC
GACGGCACCC TTTGGGCCTG GGGCGGGAAC GGCTTCGGCC AGCTCGGCCT GGGCGATACC
GACAACCGCG ATGCCCCGGT GCAGGTGGGC AGCGACAACG ACTGGGCCGC ACTGAACGCG
GGCCAGCGCT ACAGCCTGGC CGTCAAGAAC GATGGCAGCC TATGGTCCTG GGGCTGGAAC
GACTTCGGCG AACTCGGCCT GGGCGACACC GACGACCGTC ATGCACCGGA GCAGGTGGGC
GGCGGCATGG AGTGGGCCGC AGTAACCGCG GGCATGTACC ACACCCTGGG CGTCAAGGCC
GACGGCACCC TCCGGGCCTG GGGCCGGAAT GACTTCGGCG AGCTTGGGCT GGGCGTCATG
GTGTACATCA CCTCGCCGCT TCAGACTGTC ACCGAAGCCG ACTGGGCCGC GGCAAGCGCG
GGCCAATACC AGACCCAGGC GGTCAAGGCT GACGGCAGCC TCTGGGGCTG GGGCCGGAAC
CACTCCGGCC AGCTCGGCCT GGGCGACACC GACGACCGTC ATGCACCGGT ACAGGTGGGG
GGTGACAGCG ACTGGACCTC ATTGAGTGTG GGCCGGGAAC ACACCCTGGC CGTCAAGGCC
GATGGCACGC TCTGGGGGTG GGGACAGAAC TACAATGGGC AACTGGGCCT GGGTGATACG
GACGACCGCA AAACCCCGGA GCGGGTGGGT AGCGACAGCG ACTGGGCCAC AGTGAGTGCG
GGCACGGGGT ACACCCTGGC GGTCAAGGAC GACGGCACGC TCTGGGCCTG GGGCCGGAAC
AGCCATGGCC AGCTCGGTCT GGGCGATACC AACAACCGGG ATGCGCCGGT ACAGGTGGCT
AGTGATAACG ACTGGGCCGC AGTGAGTGCG GGCAGTCGGC ACACCCTGGC GGTCAAGAAC
GACGGCACGC TCTGGGCCTG GGGCCGGAAC AGTGATGGCC AGCTCGGCCT GGGCGATACC
GACAACCGCG ATGTGCCGGA GCAGGTGGGC AGCGACACTG ACTGGGCCGC AGTAAGCACC
GGCAGTGGCC ACACCCTGGC GGTCAAGACC GACGGCACGC TCTGGGCCTG GGGCCGGAAC
AGTGATGGCC AGCTCGGTTT GGGCGACACC GACGAGCGCC ACGCCCCGGA GCAGGTGGGC
GGTGACAGCG ACTGGGCTGC AGTGACGGCG GGCTGGCAAC ACACCCTGGC CATCAAGAAC
GACGGAACGC TTTGGGGATG GGGGCTGAAC CTCTACGGCC AGCTCGGGCT GGGCGATACC
GACGGCCGCC ACGCACCAAT GCAGGTGGGC AGCGACAGTG ACTGGGCCAC AGTGGCCGCG
GGCAGGTACC ACACCCTGGC CGTCAAAGAC GACGGCACCC TCCGGGCCTG GGGCCGGAAC
CGTTTCGGCC AGCTCGGCCA GCGCACCTAC CGGTTCGACC AGCCCCAGGA GGTGCCGGGG
TGGTAG
|
|---|
| Protein sequence | MRLIAPPFRL LSVGLILLLM ALLTACGGGS SSTDDTSEDT YAVGGTLTGL EQGHTITLQL
NGASDLTLDH TANDNPYSFA VKLPHGSAYE VTLPAEPPQH HCTIHNATGT VDGAVMNVDV
ECTAFPVLAA GGVHTLAMKA DGTLWAWGQN NVGQLGLGDT EKRDTPAQVG SDTDWAAVSA
GGAYTLAVKD DGTLWAWGEN YFGQLGLGDT DDRHAPEQVG SDSDWVAVSA GRHHTLALKA
DGTLWAWGRN YFGQLGLGGT TNRNAPEQVG SHSDWAGVIG GDRHSLAVRE DGTLWSWGQN
NVGQLGLGDT VERRRPEQVG NDSDWATVSA GLLHTLAVKN DGTLWAWGGN GFGQLGLGDT
DNRDAPVQVG SDNDWAALNA GQRYSLAVKN DGSLWSWGWN DFGELGLGDT DDRHAPEQVG
GGMEWAAVTA GMYHTLGVKA DGTLRAWGRN DFGELGLGVM VYITSPLQTV TEADWAAASA
GQYQTQAVKA DGSLWGWGRN HSGQLGLGDT DDRHAPVQVG GDSDWTSLSV GREHTLAVKA
DGTLWGWGQN YNGQLGLGDT DDRKTPERVG SDSDWATVSA GTGYTLAVKD DGTLWAWGRN
SHGQLGLGDT NNRDAPVQVA SDNDWAAVSA GSRHTLAVKN DGTLWAWGRN SDGQLGLGDT
DNRDVPEQVG SDTDWAAVST GSGHTLAVKT DGTLWAWGRN SDGQLGLGDT DERHAPEQVG
GDSDWAAVTA GWQHTLAIKN DGTLWGWGLN LYGQLGLGDT DGRHAPMQVG SDSDWATVAA
GRYHTLAVKD DGTLRAWGRN RFGQLGQRTY RFDQPQEVPG W
|
|---|
| |