| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2678 |
|---|
| Symbol | |
|---|
| ID | 4269553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 3032302 |
|---|
| End bp | 3033309 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638127437 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_743508 |
|---|
| Protein GI | 114321825 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000277993 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000000000000308835 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC TGATTACCGG CGCGGCCGGC TTCATCGGCT ACCACACCGC CCAGGCGCTG
CTGGCTCGCG GCGACGAGGT CGTCGGCCTG GACAACCTCA ATGACTATTA CGACCCACGG
CTCAAACGGG CACGCCTGGC CCGGCTCGAG GGGCAGCCGG GCTTCCGCTT CGTCAAGCTG
GATCTGGCCG ACCGGGCCGG AATGGCCGAA CTGTTCCGCG CGGAACGCTT CCAACGGGTG
ATCCACCTGG CCGCCCAGGC GGGCGTGCGC CACTCGCTCA CCGACCCCTA CAGCTATGTA
GACAGCAACG TGAGCGGCAC GCTGAACGTG CTTGAGGGTT GCCGCTACAA CGACGTGGAG
CACCTCACCT ACGCCTCCAC CAGTTCGGTC TACGGGGCCC ACGAGGACAT GCCCTTCACC
GAGCACCGGC ATACCGACCA CCCGCTGGCC ATCTATGCGG CGACGAAGAA GGCCACGGAA
CACATGGCCC ACAGCTACGC CCACCTTTAC GGGCTGCCTT GCACCGGGTT GCGCTTCTTC
ACCGTCTACG GCCCCTGGGG CCGCCCCGAC ATGGCGCTGT TCCTGTTCAC CCGCAAGATC
CTCGCCGGTG AGCCCATCGA CATCTACAAC AACGGCGATC ACGGCCGGGA TTTCACCTAT
GTGGATGACA TTGTCGACGG CGTCATCCGC GCCTCTGACC GGGTGGCCCG CCGCAATCCG
GAGTGGGACC CGAAGCGGCC GGACACGGCC ACATCCAATG CCCCCTGGCG GATCTACAAC
ATCGGCGCCA ACCGTCCGGT CCGCCTGATG CACTACGTCG AGGTGCTGGA GGAGGCCCTG
GGACGCAAGG CGGAGAAAAA CTTCCTGCCG CTGCAACCGG GTGATGTGCC AGAGACCCAC
GCCGATGTCT CGGCGCTGGC CCAGGATACC GGGTATTCAC CCAAGGTGTC GGTGGAGGAG
GGCATCCGCC GCTTCGTCGA CTGGTACCGG GAATACCACC ACGTCTAG
|
|---|
| Protein sequence | MKHLITGAAG FIGYHTAQAL LARGDEVVGL DNLNDYYDPR LKRARLARLE GQPGFRFVKL
DLADRAGMAE LFRAERFQRV IHLAAQAGVR HSLTDPYSYV DSNVSGTLNV LEGCRYNDVE
HLTYASTSSV YGAHEDMPFT EHRHTDHPLA IYAATKKATE HMAHSYAHLY GLPCTGLRFF
TVYGPWGRPD MALFLFTRKI LAGEPIDIYN NGDHGRDFTY VDDIVDGVIR ASDRVARRNP
EWDPKRPDTA TSNAPWRIYN IGANRPVRLM HYVEVLEEAL GRKAEKNFLP LQPGDVPETH
ADVSALAQDT GYSPKVSVEE GIRRFVDWYR EYHHV
|
|---|
| |