| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2615 |
|---|
| Symbol | |
|---|
| ID | 4269524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2965335 |
|---|
| End bp | 2966093 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638127374 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_743445 |
|---|
| Protein GI | 114321762 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.234339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG CCATGCAGCT GATACCCGCC ATCGATCTCA AGGACGGCCG CTGCGTCCGC
CTGCGCCAGG GGCGCATGGA CGATGAGACG GTCTTCTCCG ACGACCCCGT TGCCATGGCC
GGTCGCTGGG TGGCCGCCGG TACCCGGCGC CTGCACCTGG TGGATCTCAA CGGTGCGGTC
GCCGGCAAGC CGGTCAATGC CGAGATCATC CACCGCATCG CCACCCGCTA TCCTGACCTG
CGCATCCAGG TGGGCGGCGG CATCCGTGAC CTGGACACCA TCCGCGGCTA CCGCGAGGCC
GGGGTGGATG ATCTGATCAT CGGCACCCAG GCGGTGCGCC GGCCGGAGTT CGTCACCGAG
GCCTGTCAGG CCTTCCCCGG GCATATCATC GTCGGCCTGG ACGCCCGTGA CGGCCGGGTG
GCCACCGACG GCTGGGAGCA GGTCTCCGAG GTGCGAGCGG TGGACCTGGC CCGCCGGTTC
GAGGCCGCCG GGGTCAATGC CATTGTCTTC ACCGACATCG GCCGTGACGG CATGATGAAA
GGGGTGAATA TCGAGGCCAC CCGTGAGCTG GCCCGCGCCA TCACCATCCC GGTGATCGCC
TCCGGAGGCG TGTCCAGCCT GGAGGATGTG CGCGCGCTGT GTGCCGCCGC CGGTGACGGC
ATCAGCGGGG CCATTGTCGG CCGGGCGCTC TACGAGGGCA GCCTGGATCT GGCCGAGGCC
CAGGGGTTGG CCGACGAGCT CTGCGGGGTG AAGCCGTGA
|
|---|
| Protein sequence | MSDAMQLIPA IDLKDGRCVR LRQGRMDDET VFSDDPVAMA GRWVAAGTRR LHLVDLNGAV
AGKPVNAEII HRIATRYPDL RIQVGGGIRD LDTIRGYREA GVDDLIIGTQ AVRRPEFVTE
ACQAFPGHII VGLDARDGRV ATDGWEQVSE VRAVDLARRF EAAGVNAIVF TDIGRDGMMK
GVNIEATREL ARAITIPVIA SGGVSSLEDV RALCAAAGDG ISGAIVGRAL YEGSLDLAEA
QGLADELCGV KP
|
|---|
| |